Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MARK2P9-201ENST00000430958 1727 ntBASIC12.09□□□□□ -0.47
UBA52P62987 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 SFTPA1-202ENST00000419470 2210 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC12.09□□□□□ -0.47
UBA52P62987 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
UBA52P62987 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
UBA52P62987 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.09□□□□□ -0.47
UBA52P62987 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.09□□□□□ -0.47
UBA52P62987 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC12.09□□□□□ -0.47
UBA52P62987 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC12.09□□□□□ -0.47
UBA52P62987 CHMP1AP1-201ENST00000445563 662 ntBASIC12.09□□□□□ -0.47
UBA52P62987 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.09□□□□□ -0.47
UBA52P62987 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 AC100850.1-201ENST00000506768 649 ntBASIC12.09□□□□□ -0.47
UBA52P62987 AC022217.1-201ENST00000521069 738 ntBASIC12.09□□□□□ -0.47
UBA52P62987 AP003171.2-201ENST00000528208 925 ntBASIC12.09□□□□□ -0.47
UBA52P62987 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.09□□□□□ -0.47
UBA52P62987 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC12.09□□□□□ -0.47
UBA52P62987 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
UBA52P62987 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.09□□□□□ -0.47
UBA52P62987 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.09□□□□□ -0.47
UBA52P62987 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.09□□□□□ -0.47
UBA52P62987 FGFR3P5-201ENST00000564496 886 ntBASIC12.09□□□□□ -0.47
UBA52P62987 MIR4722-201ENST00000578292 60 ntBASIC12.09□□□□□ -0.47
UBA52P62987 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC12.09□□□□□ -0.47
UBA52P62987 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
UBA52P62987 AC100757.4-201ENST00000626934 759 ntBASIC12.09□□□□□ -0.47
UBA52P62987 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.09□□□□□ -0.47
UBA52P62987 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.09□□□□□ -0.47
UBA52P62987 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.09□□□□□ -0.47
UBA52P62987 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
UBA52P62987 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
UBA52P62987 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.09□□□□□ -0.47
UBA52P62987 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
UBA52P62987 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBA52P62987 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
UBA52P62987 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
UBA52P62987 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
UBA52P62987 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
UBA52P62987 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.08□□□□□ -0.47
UBA52P62987 AC073957.3-201ENST00000609998 6758 ntBASIC12.08□□□□□ -0.48
UBA52P62987 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
UBA52P62987 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.08□□□□□ -0.48
UBA52P62987 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
UBA52P62987 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
UBA52P62987 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.08□□□□□ -0.48
UBA52P62987 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC12.08□□□□□ -0.48
UBA52P62987 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.08□□□□□ -0.48
UBA52P62987 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.08□□□□□ -0.48
UBA52P62987 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.08□□□□□ -0.48
UBA52P62987 RPS2P36-201ENST00000456516 831 ntBASIC12.08□□□□□ -0.48
UBA52P62987 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.08□□□□□ -0.48
UBA52P62987 FTLP10-202ENST00000505798 471 ntBASIC12.08□□□□□ -0.48
UBA52P62987 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.08□□□□□ -0.48
UBA52P62987 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
UBA52P62987 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.08□□□□□ -0.48
UBA52P62987 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.08□□□□□ -0.48
UBA52P62987 RN7SL774P-201ENST00000577467 290 ntBASIC12.08□□□□□ -0.48
UBA52P62987 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC12.08□□□□□ -0.48
UBA52P62987 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms