Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 AL353779.1-201ENST00000434793 351 ntBASIC11.7□□□□□ -0.54
NKX2-5P52952 RHOQP3-201ENST00000437982 621 ntBASIC11.7□□□□□ -0.54
NKX2-5P52952 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11.7□□□□□ -0.54
NKX2-5P52952 MLF1-209ENST00000482628 1050 ntTSL 5 BASIC11.7□□□□□ -0.54
NKX2-5P52952 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.7□□□□□ -0.54
NKX2-5P52952 FOSL1P1-201ENST00000511041 816 ntBASIC11.7□□□□□ -0.54
NKX2-5P52952 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.7□□□□□ -0.54
NKX2-5P52952 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC11.7□□□□□ -0.54
NKX2-5P52952 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.7□□□□□ -0.54
NKX2-5P52952 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC11.7□□□□□ -0.54
NKX2-5P52952 SLC25A6P4-201ENST00000586535 553 ntBASIC11.7□□□□□ -0.54
NKX2-5P52952 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC11.7□□□□□ -0.54
NKX2-5P52952 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 BCAS3-222ENST00000589222 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 AC243964.3-201ENST00000623022 2028 ntBASIC11.7□□□□□ -0.54
NKX2-5P52952 ACTR1A-201ENST00000369905 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 PIGG-201ENST00000310340 3203 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
NKX2-5P52952 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
NKX2-5P52952 CDC37L1-201ENST00000381854 3502 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 AC004471.2-201ENST00000609936 1514 ntTSL 3 BASIC11.7□□□□□ -0.54
NKX2-5P52952 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
NKX2-5P52952 RAPGEF3-202ENST00000395358 4092 ntTSL 2 BASIC11.7□□□□□ -0.54
NKX2-5P52952 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.7□□□□□ -0.54
NKX2-5P52952 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC11.7□□□□□ -0.54
NKX2-5P52952 RTEL1P1-201ENST00000504490 3685 ntBASIC11.7□□□□□ -0.54
NKX2-5P52952 AVL9-202ENST00000409301 4336 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-5P52952 CADM3-AS1-201ENST00000415675 5044 ntTSL 2 BASIC11.69□□□□□ -0.54
NKX2-5P52952 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 TCF4-276ENST00000635822 7805 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-5P52952 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
NKX2-5P52952 MEF2D-202ENST00000360595 3194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 C9orf64-201ENST00000314700 2067 ntTSL 2 BASIC11.69□□□□□ -0.54
NKX2-5P52952 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
NKX2-5P52952 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 ZNF730-202ENST00000597761 2374 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
NKX2-5P52952 SRP68-212ENST00000602720 2037 ntTSL 2 BASIC11.69□□□□□ -0.54
NKX2-5P52952 ZNF574-201ENST00000222339 3309 ntTSL 3 BASIC11.69□□□□□ -0.54
NKX2-5P52952 AC006254.1-201ENST00000468472 5640 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
NKX2-5P52952 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 AL139220.2-207ENST00000434244 2644 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 SIRT1-204ENST00000432464 3587 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-5P52952 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 PTPRR-201ENST00000283228 3529 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 INMT-MINDY4-202ENST00000458257 2877 ntAPPRIS P5 TSL 2 BASIC11.69□□□□□ -0.54
NKX2-5P52952 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-5P52952 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-5P52952 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
NKX2-5P52952 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC11.69□□□□□ -0.54
NKX2-5P52952 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-5P52952 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 AC096734.2-201ENST00000562054 433 ntBASIC11.69□□□□□ -0.54
NKX2-5P52952 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC11.69□□□□□ -0.54
NKX2-5P52952 RARRES2P8-201ENST00000566335 367 ntBASIC11.69□□□□□ -0.54
NKX2-5P52952 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-5P52952 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
NKX2-5P52952 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-5P52952 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-5P52952 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
NKX2-5P52952 TSPAN6-201ENST00000373020 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 RASGEF1A-203ENST00000395809 4104 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
NKX2-5P52952 TP63-209ENST00000437221 2500 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC11.69□□□□□ -0.54
NKX2-5P52952 MINDY1-203ENST00000361936 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 ARHGAP40-202ENST00000373345 2841 ntAPPRIS P5 TSL 5 BASIC11.69□□□□□ -0.54
NKX2-5P52952 C14orf159-234ENST00000525393 2471 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-5P52952 PPP4R3A-206ENST00000554943 3369 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-5P52952 AC093330.2-201ENST00000624814 3998 ntBASIC11.69□□□□□ -0.54
NKX2-5P52952 SEPT10-203ENST00000397714 2719 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
NKX2-5P52952 ERVMER34-1-201ENST00000440542 2744 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 AC107892.1-201ENST00000577382 2727 ntTSL 2 BASIC11.69□□□□□ -0.54
NKX2-5P52952 DUOXA1-208ENST00000558996 2684 ntTSL 2 BASIC11.69□□□□□ -0.54
NKX2-5P52952 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 TUFT1-204ENST00000392712 2946 ntTSL 5 BASIC11.69□□□□□ -0.54
NKX2-5P52952 PTGFR-202ENST00000370757 4379 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 AP003355.2-201ENST00000605923 2622 ntBASIC11.69□□□□□ -0.54
NKX2-5P52952 TTN-AS1-209ENST00000456053 2033 ntTSL 2 BASIC11.69□□□□□ -0.54
NKX2-5P52952 IFT80-201ENST00000326448 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
NKX2-5P52952 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC11.69□□□□□ -0.54
NKX2-5P52952 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
NKX2-5P52952 KLHL38-201ENST00000325995 1982 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-5P52952 CLPB-203ENST00000437826 3379 ntTSL 2 BASIC11.68□□□□□ -0.54
NKX2-5P52952 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-5P52952 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC11.68□□□□□ -0.54
NKX2-5P52952 KIR2DL4-205ENST00000396284 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-5P52952 GABRR2-201ENST00000402938 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-5P52952 PCDHB11-201ENST00000354757 4198 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
NKX2-5P52952 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
NKX2-5P52952 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC11.68□□□□□ -0.54
NKX2-5P52952 CDC14A-201ENST00000336454 4137 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
NKX2-5P52952 CANT1-202ENST00000392446 3252 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms