Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.9□□□□□ -0.18
LTBRP36941 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBRP36941 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBRP36941 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBRP36941 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.9□□□□□ -0.18
LTBRP36941 CICP24-201ENST00000605464 2705 ntBASIC13.9□□□□□ -0.18
LTBRP36941 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBRP36941 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.9□□□□□ -0.18
LTBRP36941 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LTBRP36941 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.9□□□□□ -0.18
LTBRP36941 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBRP36941 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.9□□□□□ -0.18
LTBRP36941 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
LTBRP36941 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC13.9□□□□□ -0.18
LTBRP36941 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LTBRP36941 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LTBRP36941 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.89□□□□□ -0.19
LTBRP36941 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LTBRP36941 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LTBRP36941 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LTBRP36941 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
LTBRP36941 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LTBRP36941 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LTBRP36941 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
LTBRP36941 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC13.89□□□□□ -0.19
LTBRP36941 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
LTBRP36941 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LTBRP36941 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC13.89□□□□□ -0.19
LTBRP36941 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC13.89□□□□□ -0.19
LTBRP36941 OR2A1-AS1-203ENST00000468575 568 ntBASIC13.89□□□□□ -0.19
LTBRP36941 LRRC75A-AS1-208ENST00000480811 968 ntTSL 2 BASIC13.89□□□□□ -0.19
LTBRP36941 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC13.89□□□□□ -0.19
LTBRP36941 AC104640.1-201ENST00000562617 2109 ntBASIC13.89□□□□□ -0.19
LTBRP36941 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC13.89□□□□□ -0.19
LTBRP36941 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC13.89□□□□□ -0.19
LTBRP36941 AC090616.6-202ENST00000583601 1088 ntBASIC13.89□□□□□ -0.19
LTBRP36941 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC13.89□□□□□ -0.19
LTBRP36941 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC13.89□□□□□ -0.19
LTBRP36941 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC13.89□□□□□ -0.19
LTBRP36941 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LTBRP36941 CR392039.2-201ENST00000623182 509 ntBASIC13.89□□□□□ -0.19
LTBRP36941 AC010335.3-201ENST00000623767 531 ntBASIC13.89□□□□□ -0.19
LTBRP36941 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
LTBRP36941 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LTBRP36941 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
LTBRP36941 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LTBRP36941 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
LTBRP36941 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LTBRP36941 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LTBRP36941 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
LTBRP36941 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LTBRP36941 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.89□□□□□ -0.19
LTBRP36941 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
LTBRP36941 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
LTBRP36941 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LTBRP36941 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC13.88□□□□□ -0.19
LTBRP36941 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
LTBRP36941 CLUHP8-201ENST00000547527 1485 ntBASIC13.88□□□□□ -0.19
LTBRP36941 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.88□□□□□ -0.19
LTBRP36941 SRL-202ENST00000537996 1814 ntTSL 2 BASIC13.88□□□□□ -0.19
LTBRP36941 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LTBRP36941 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
LTBRP36941 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
LTBRP36941 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC13.88□□□□□ -0.19
LTBRP36941 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
LTBRP36941 ZNF589-202ENST00000412564 593 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC13.88□□□□□ -0.19
LTBRP36941 SMIM26-202ENST00000435844 575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 EEF1GP1-201ENST00000457231 1299 ntBASIC13.88□□□□□ -0.19
LTBRP36941 RN7SL111P-201ENST00000468841 285 ntBASIC13.88□□□□□ -0.19
LTBRP36941 AC098591.1-202ENST00000507914 937 ntBASIC13.88□□□□□ -0.19
LTBRP36941 SLC25A51P3-201ENST00000521814 889 ntBASIC13.88□□□□□ -0.19
LTBRP36941 AP001979.2-201ENST00000526254 975 ntTSL 5 BASIC13.88□□□□□ -0.19
LTBRP36941 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC13.88□□□□□ -0.19
LTBRP36941 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC13.88□□□□□ -0.19
LTBRP36941 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC13.88□□□□□ -0.19
LTBRP36941 AP001120.3-201ENST00000585729 489 ntBASIC13.88□□□□□ -0.19
LTBRP36941 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
LTBRP36941 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LTBRP36941 CALM3-206ENST00000594523 540 ntTSL 4 BASIC13.88□□□□□ -0.19
LTBRP36941 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
LTBRP36941 AC091736.1-201ENST00000609370 305 ntBASIC13.88□□□□□ -0.19
LTBRP36941 Z82244.1-201ENST00000631502 840 ntBASIC13.88□□□□□ -0.19
LTBRP36941 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LTBRP36941 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
LTBRP36941 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms