Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN1P35523 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.83■□□□□ 0.12
CLCN1P35523 AL035633.1-201ENST00000406139 838 ntBASIC15.83■□□□□ 0.12
CLCN1P35523 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN1P35523 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 C2orf27AP3-201ENST00000434123 579 ntBASIC15.83■□□□□ 0.12
CLCN1P35523 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.83■□□□□ 0.12
CLCN1P35523 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN1P35523 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 AC078819.1-201ENST00000547454 765 ntBASIC15.83■□□□□ 0.12
CLCN1P35523 AC012085.1-201ENST00000548270 765 ntBASIC15.83■□□□□ 0.12
CLCN1P35523 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CLCN1P35523 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCN1P35523 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.83■□□□□ 0.12
CLCN1P35523 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCN1P35523 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCN1P35523 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCN1P35523 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.83■□□□□ 0.12
CLCN1P35523 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN1P35523 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN1P35523 AL354718.3-201ENST00000616414 581 ntBASIC15.83■□□□□ 0.12
CLCN1P35523 CR382287.1-201ENST00000623954 586 ntBASIC15.83■□□□□ 0.12
CLCN1P35523 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CLCN1P35523 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 TNRC6B-203ENST00000402203 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN1P35523 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN1P35523 EIF3L-214ENST00000624234 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CLCN1P35523 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN1P35523 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
CLCN1P35523 AC080013.1-204ENST00000607426 2185 ntBASIC15.83■□□□□ 0.12
CLCN1P35523 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 NBR1-205ENST00000589872 3097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 ARL13B-210ENST00000535334 3906 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 PRPF40B-202ENST00000380281 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCN1P35523 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC15.83■□□□□ 0.12
CLCN1P35523 AL135999.1-201ENST00000555968 3243 ntTSL 2 BASIC15.83■□□□□ 0.12
CLCN1P35523 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CLCN1P35523 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CLCN1P35523 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCN1P35523 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CLCN1P35523 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCN1P35523 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CLCN1P35523 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC15.82■□□□□ 0.12
CLCN1P35523 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.82■□□□□ 0.12
CLCN1P35523 USP17L6P-201ENST00000382470 1197 ntBASIC15.82■□□□□ 0.12
CLCN1P35523 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CLCN1P35523 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 CD8B2-202ENST00000417670 633 ntBASIC15.82■□□□□ 0.12
CLCN1P35523 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.82■□□□□ 0.12
CLCN1P35523 FAM8A4P-201ENST00000435433 1213 ntBASIC15.82■□□□□ 0.12
CLCN1P35523 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCN1P35523 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCN1P35523 COX20P2-201ENST00000452636 358 ntBASIC15.82■□□□□ 0.12
CLCN1P35523 AC007551.1-201ENST00000457394 519 ntBASIC15.82■□□□□ 0.12
CLCN1P35523 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CLCN1P35523 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCN1P35523 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.82■□□□□ 0.12
CLCN1P35523 OR10B1P-201ENST00000601666 907 ntBASIC15.82■□□□□ 0.12
CLCN1P35523 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.82■□□□□ 0.12
CLCN1P35523 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCN1P35523 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
CLCN1P35523 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CLCN1P35523 DYNC1I1-204ENST00000437599 2895 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
CLCN1P35523 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC15.82■□□□□ 0.12
CLCN1P35523 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC15.82■□□□□ 0.12
CLCN1P35523 AC010997.4-201ENST00000609200 1890 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CLCN1P35523 AC137834.1-201ENST00000548184 2107 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CLCN1P35523 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms