Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 SNX15-201ENST00000352068 771 ntTSL 5 BASIC18.17■□□□□ 0.5
USP6P35125 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
USP6P35125 HNRNPA1P3-201ENST00000440968 551 ntBASIC18.17■□□□□ 0.5
USP6P35125 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC18.17■□□□□ 0.5
USP6P35125 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
USP6P35125 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC18.17■□□□□ 0.5
USP6P35125 PRDX2P3-201ENST00000515779 586 ntBASIC18.17■□□□□ 0.5
USP6P35125 IMMP1L-213ENST00000533642 314 ntTSL 2 BASIC18.17■□□□□ 0.5
USP6P35125 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP6P35125 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC18.17■□□□□ 0.5
USP6P35125 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC18.17■□□□□ 0.5
USP6P35125 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC18.17■□□□□ 0.5
USP6P35125 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC18.17■□□□□ 0.5
USP6P35125 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC18.17■□□□□ 0.5
USP6P35125 AC012531.1-201ENST00000562848 2680 ntBASIC18.17■□□□□ 0.5
USP6P35125 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP6P35125 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.17■□□□□ 0.5
USP6P35125 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC18.17■□□□□ 0.5
USP6P35125 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
USP6P35125 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC18.17■□□□□ 0.5
USP6P35125 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
USP6P35125 AC124319.4-201ENST00000622931 2161 ntBASIC18.17■□□□□ 0.5
USP6P35125 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP6P35125 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
USP6P35125 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP6P35125 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP6P35125 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP6P35125 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP6P35125 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC18.17■□□□□ 0.5
USP6P35125 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP6P35125 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC18.17■□□□□ 0.5
USP6P35125 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP6P35125 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
USP6P35125 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP6P35125 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP6P35125 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP6P35125 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
USP6P35125 UBL7-206ENST00000565335 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP6P35125 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP6P35125 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP6P35125 COQ4-202ENST00000372875 928 ntTSL 2 BASIC18.16■□□□□ 0.5
USP6P35125 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP6P35125 KRTAP12-1-201ENST00000391617 588 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
USP6P35125 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
USP6P35125 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
USP6P35125 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
USP6P35125 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC18.16■□□□□ 0.5
USP6P35125 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC18.16■□□□□ 0.5
USP6P35125 AC117500.5-201ENST00000623233 527 ntBASIC18.16■□□□□ 0.5
USP6P35125 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP6P35125 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP6P35125 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP6P35125 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP6P35125 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP6P35125 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC18.16■□□□□ 0.5
USP6P35125 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP6P35125 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
USP6P35125 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP6P35125 STK3-218ENST00000617590 2485 ntTSL 5 BASIC18.16■□□□□ 0.5
USP6P35125 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC18.16■□□□□ 0.5
USP6P35125 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
USP6P35125 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 FAM197Y6-201ENST00000420524 766 ntBASIC18.15■□□□□ 0.5
USP6P35125 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC18.15■□□□□ 0.5
USP6P35125 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC18.15■□□□□ 0.5
USP6P35125 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
USP6P35125 RN7SL478P-201ENST00000584358 298 ntBASIC18.15■□□□□ 0.5
USP6P35125 CLPP-205ENST00000596605 646 ntTSL 2 BASIC18.15■□□□□ 0.5
USP6P35125 AC010601.2-201ENST00000623060 774 ntBASIC18.15■□□□□ 0.5
USP6P35125 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC18.15■□□□□ 0.5
USP6P35125 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 AC011474.4-201ENST00000623523 2076 ntBASIC18.15■□□□□ 0.5
USP6P35125 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 FAM183BP-201ENST00000409072 1595 ntBASIC18.15■□□□□ 0.5
USP6P35125 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC18.15■□□□□ 0.5
USP6P35125 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.15■□□□□ 0.5
USP6P35125 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
USP6P35125 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC18.15■□□□□ 0.5
USP6P35125 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
USP6P35125 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC18.15■□□□□ 0.5
USP6P35125 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
USP6P35125 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
USP6P35125 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
USP6P35125 TEDDM2P-201ENST00000414169 786 ntBASIC18.15■□□□□ 0.5
USP6P35125 HNRNPA1P33-201ENST00000421426 561 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms