Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC12.57□□□□□ -0.4
FREM3P0C091 AC097376.2-205ENST00000610159 5334 ntBASIC12.57□□□□□ -0.4
FREM3P0C091 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 EGLN3-205ENST00000547327 2849 ntBASIC12.57□□□□□ -0.4
FREM3P0C091 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.57□□□□□ -0.4
FREM3P0C091 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC12.57□□□□□ -0.4
FREM3P0C091 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.57□□□□□ -0.4
FREM3P0C091 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC12.57□□□□□ -0.4
FREM3P0C091 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.57□□□□□ -0.4
FREM3P0C091 AC132825.4-202ENST00000578792 434 ntBASIC12.57□□□□□ -0.4
FREM3P0C091 MIR4750-201ENST00000584564 56 ntBASIC12.57□□□□□ -0.4
FREM3P0C091 AL359091.4-201ENST00000610052 409 ntBASIC12.57□□□□□ -0.4
FREM3P0C091 AC006158.1-201ENST00000610661 249 ntBASIC12.57□□□□□ -0.4
FREM3P0C091 MIR6727-201ENST00000620702 65 ntBASIC12.57□□□□□ -0.4
FREM3P0C091 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
FREM3P0C091 AL359845.1-201ENST00000458202 1648 ntBASIC12.57□□□□□ -0.4
FREM3P0C091 AL590824.1-201ENST00000403828 1349 ntBASIC12.57□□□□□ -0.4
FREM3P0C091 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
FREM3P0C091 AC138761.6-201ENST00000583997 1423 ntBASIC12.57□□□□□ -0.4
FREM3P0C091 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 PCDHA6-201ENST00000378126 3267 ntBASIC12.57□□□□□ -0.4
FREM3P0C091 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
FREM3P0C091 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.57□□□□□ -0.4
FREM3P0C091 AL445250.1-201ENST00000641671 2259 ntBASIC12.57□□□□□ -0.4
FREM3P0C091 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC12.57□□□□□ -0.4
FREM3P0C091 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
FREM3P0C091 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
FREM3P0C091 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 OR2W2P-201ENST00000406313 909 ntBASIC12.56□□□□□ -0.4
FREM3P0C091 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
FREM3P0C091 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC12.56□□□□□ -0.4
FREM3P0C091 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
FREM3P0C091 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
FREM3P0C091 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
FREM3P0C091 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.56□□□□□ -0.4
FREM3P0C091 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.56□□□□□ -0.4
FREM3P0C091 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
FREM3P0C091 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 AC008620.2-201ENST00000510294 1569 ntBASIC12.56□□□□□ -0.4
FREM3P0C091 NRADDP-202ENST00000641269 1585 ntBASIC12.56□□□□□ -0.4
FREM3P0C091 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.56□□□□□ -0.4
FREM3P0C091 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
FREM3P0C091 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.56□□□□□ -0.4
FREM3P0C091 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.56□□□□□ -0.4
FREM3P0C091 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.56□□□□□ -0.4
FREM3P0C091 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.56□□□□□ -0.4
FREM3P0C091 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.56□□□□□ -0.4
FREM3P0C091 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
FREM3P0C091 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
FREM3P0C091 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.56□□□□□ -0.4
FREM3P0C091 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC12.56□□□□□ -0.4
FREM3P0C091 GUSBP10-201ENST00000417412 665 ntBASIC12.56□□□□□ -0.4
FREM3P0C091 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
FREM3P0C091 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC12.56□□□□□ -0.4
FREM3P0C091 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 BUD31-205ENST00000456893 512 ntTSL 5 BASIC12.56□□□□□ -0.4
FREM3P0C091 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC12.56□□□□□ -0.4
FREM3P0C091 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
FREM3P0C091 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC12.56□□□□□ -0.4
FREM3P0C091 AC105137.3-201ENST00000617588 984 ntBASIC12.56□□□□□ -0.4
FREM3P0C091 MIR6858-201ENST00000620733 67 ntBASIC12.56□□□□□ -0.4
FREM3P0C091 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.56□□□□□ -0.4
FREM3P0C091 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
FREM3P0C091 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
FREM3P0C091 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms