Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC15.6■□□□□ 0.09
TPM3P06753 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC15.6■□□□□ 0.09
TPM3P06753 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 TMEM104-204ENST00000582330 4679 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TPM3P06753 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC15.6■□□□□ 0.09
TPM3P06753 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC15.6■□□□□ 0.09
TPM3P06753 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TPM3P06753 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TPM3P06753 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TPM3P06753 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 C1R-209ENST00000542285 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TPM3P06753 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.6■□□□□ 0.09
TPM3P06753 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.6■□□□□ 0.09
TPM3P06753 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.6■□□□□ 0.09
TPM3P06753 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.6■□□□□ 0.09
TPM3P06753 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.6■□□□□ 0.09
TPM3P06753 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.6■□□□□ 0.09
TPM3P06753 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.6■□□□□ 0.09
TPM3P06753 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.6■□□□□ 0.09
TPM3P06753 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.6■□□□□ 0.09
TPM3P06753 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.6■□□□□ 0.09
TPM3P06753 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 AC138951.2-201ENST00000623455 1161 ntBASIC15.6■□□□□ 0.09
TPM3P06753 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TPM3P06753 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC15.6■□□□□ 0.09
TPM3P06753 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TPM3P06753 C1QTNF9-202ENST00000382071 1854 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TPM3P06753 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TPM3P06753 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.6■□□□□ 0.09
TPM3P06753 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 IST1-203ENST00000378799 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
TPM3P06753 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TPM3P06753 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TPM3P06753 USB1-207ENST00000563149 1751 ntTSL 2 BASIC15.59■□□□□ 0.09
TPM3P06753 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM3P06753 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TPM3P06753 SLC4A2-204ENST00000461735 4387 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TPM3P06753 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TPM3P06753 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TPM3P06753 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC15.59■□□□□ 0.09
TPM3P06753 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
TPM3P06753 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM3P06753 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TPM3P06753 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM3P06753 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC15.59■□□□□ 0.09
TPM3P06753 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC15.59■□□□□ 0.09
TPM3P06753 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC15.59■□□□□ 0.09
TPM3P06753 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM3P06753 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM3P06753 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TPM3P06753 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM3P06753 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TPM3P06753 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TPM3P06753 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TPM3P06753 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TPM3P06753 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.59■□□□□ 0.09
TPM3P06753 FAM197Y7-201ENST00000432892 766 ntBASIC15.59■□□□□ 0.09
TPM3P06753 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.59■□□□□ 0.09
TPM3P06753 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TPM3P06753 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TPM3P06753 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TPM3P06753 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TPM3P06753 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.59■□□□□ 0.09
TPM3P06753 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.59■□□□□ 0.09
TPM3P06753 DUX4L46-201ENST00000566845 751 ntBASIC15.59■□□□□ 0.09
TPM3P06753 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.59■□□□□ 0.09
TPM3P06753 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.59■□□□□ 0.09
TPM3P06753 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.59■□□□□ 0.09
TPM3P06753 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM3P06753 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TPM3P06753 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TPM3P06753 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM3P06753 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM3P06753 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TPM3P06753 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC15.59■□□□□ 0.09
TPM3P06753 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms