Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 COCH-203ENST00000460581 2688 ntTSL 2 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 CES1P1-201ENST00000421606 1704 ntBASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 LINC01551-201ENST00000399387 1581 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 AL732414.1-201ENST00000413346 573 ntBASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 AL512288.2-201ENST00000426041 367 ntBASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 ACRBP-204ENST00000536350 1053 ntTSL 2 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 PROX1-AS1-205ENST00000598091 720 ntTSL 5 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 AC068620.2-201ENST00000602927 529 ntBASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 PRSS1-207ENST00000619214 787 ntTSL 5 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 GOLGA8EP-201ENST00000530246 1959 ntBASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
RIMBP3Q9UFD9 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 AC091807.1-201ENST00000418838 1544 ntBASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 HNRNPC-202ENST00000420743 1559 ntTSL 2 BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 SH3BGR-204ENST00000380637 1014 ntTSL 3 BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 LINC01524-202ENST00000454600 745 ntTSL 3 BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 AC005534.1-201ENST00000455709 742 ntTSL 2 BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 LAMTOR5-AS1-202ENST00000457535 817 ntTSL 3 BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 RPL7AP4-201ENST00000483820 769 ntBASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 GFRA2-203ENST00000517892 1176 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 AC079360.1-201ENST00000543848 434 ntTSL 3 BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 AL139353.1-202ENST00000547378 474 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 AL133372.2-202ENST00000549360 768 ntTSL 3 BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 C17orf62-210ENST00000577732 1053 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RIMBP3Q9UFD9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 KCNIP1-202ENST00000377360 1197 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 AC005730.1-201ENST00000434406 344 ntBASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 LINC00158-203ENST00000440205 740 ntTSL 3 BASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 RN7SL336P-201ENST00000580171 297 ntBASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 AC010326.4-201ENST00000604665 891 ntBASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 ILK-216ENST00000627400 111 ntTSL 5 BASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 AC009093.9-201ENST00000566038 1611 ntBASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 AC091951.1-201ENST00000512854 2465 ntBASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 APTX-215ENST00000468275 1455 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 HRC-203ENST00000595625 2044 ntTSL 5 BASIC20.65■□□□□ 0.9
RIMBP3Q9UFD9 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
RIMBP3Q9UFD9 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC20.64■□□□□ 0.9
RIMBP3Q9UFD9 MRGPRX1-201ENST00000302797 1190 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
RIMBP3Q9UFD9 SPATA32-201ENST00000331780 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RIMBP3Q9UFD9 CFAP58-201ENST00000369703 466 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
RIMBP3Q9UFD9 USMG5-205ENST00000369825 789 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
RIMBP3Q9UFD9 JPT2-202ENST00000382710 962 ntTSL 2 BASIC20.64■□□□□ 0.9
RIMBP3Q9UFD9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.64■□□□□ 0.9
RIMBP3Q9UFD9 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC20.64■□□□□ 0.9
RIMBP3Q9UFD9 SGCZ-202ENST00000421524 867 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RIMBP3Q9UFD9 DANT1-202ENST00000451869 444 ntTSL 3 BASIC20.64■□□□□ 0.9
RIMBP3Q9UFD9 CLDN24-201ENST00000514470 663 ntBASIC20.64■□□□□ 0.9
RIMBP3Q9UFD9 CLDN24-202ENST00000541814 663 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
RIMBP3Q9UFD9 AC026254.3-201ENST00000584490 322 ntBASIC20.64■□□□□ 0.9
RIMBP3Q9UFD9 AC020663.1-201ENST00000588099 556 ntTSL 4 BASIC20.64■□□□□ 0.9
RIMBP3Q9UFD9 AC092327.1-201ENST00000596612 744 ntBASIC20.64■□□□□ 0.9
RIMBP3Q9UFD9 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 AL449266.1-201ENST00000357393 557 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 FAM230B-204ENST00000421576 598 ntTSL 5 BASIC20.64■□□□□ 0.89
RIMBP3Q9UFD9 LINC01874-201ENST00000427398 510 ntTSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms