Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 AC061965.1-201ENST00000560524 1465 ntBASIC12.06□□□□□ -0.48
BEST4Q8NFU0 AC007541.1-201ENST00000570282 1469 ntBASIC12.06□□□□□ -0.48
BEST4Q8NFU0 MFSD11-201ENST00000336509 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 SLITRK3-201ENST00000241274 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC12.06□□□□□ -0.48
BEST4Q8NFU0 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 HSPA8P9-201ENST00000485881 1943 ntBASIC12.05□□□□□ -0.48
BEST4Q8NFU0 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 HNRNPMP1-201ENST00000560685 1768 ntBASIC12.05□□□□□ -0.48
BEST4Q8NFU0 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 AC010536.1-201ENST00000538868 2611 ntBASIC12.05□□□□□ -0.48
BEST4Q8NFU0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 AC008825.2-201ENST00000603374 718 ntBASIC12.05□□□□□ -0.48
BEST4Q8NFU0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.05□□□□□ -0.48
BEST4Q8NFU0 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 AC092139.4-201ENST00000624318 2794 ntBASIC12.05□□□□□ -0.48
BEST4Q8NFU0 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.05□□□□□ -0.48
BEST4Q8NFU0 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 ANKRD30BP2-201ENST00000435744 1610 ntBASIC12.04□□□□□ -0.48
BEST4Q8NFU0 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC12.04□□□□□ -0.48
BEST4Q8NFU0 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms