Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RN7SL452P-201ENST00000482923 291 ntBASIC11.05□□□□□ -0.64
VPS13CQ709C8 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13CQ709C8 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 AC003688.2-201ENST00000576271 415 ntTSL 3 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 BIN3-212ENST00000640731 450 ntTSL 5 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13CQ709C8 Z98259.1-201ENST00000564261 1697 ntBASIC11.05□□□□□ -0.64
VPS13CQ709C8 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13CQ709C8 ERG-211ENST00000453032 1595 ntTSL 2 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13CQ709C8 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13CQ709C8 TPI1P3-201ENST00000335020 740 ntBASIC11.05□□□□□ -0.64
VPS13CQ709C8 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 SNCG-202ENST00000372017 701 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13CQ709C8 SRSF9P1-201ENST00000399149 530 ntBASIC11.05□□□□□ -0.64
VPS13CQ709C8 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 MBL3P-201ENST00000402234 644 ntBASIC11.05□□□□□ -0.64
VPS13CQ709C8 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 AC010335.3-201ENST00000623767 531 ntBASIC11.05□□□□□ -0.64
VPS13CQ709C8 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13CQ709C8 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13CQ709C8 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13CQ709C8 Z97653.2-201ENST00000623057 1418 ntBASIC11.05□□□□□ -0.64
VPS13CQ709C8 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
VPS13CQ709C8 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
VPS13CQ709C8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 FAM153C-208ENST00000511189 926 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 AC018868.2-201ENST00000559655 1259 ntBASIC11.04□□□□□ -0.64
VPS13CQ709C8 KRT18P8-201ENST00000581937 1246 ntBASIC11.04□□□□□ -0.64
VPS13CQ709C8 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13CQ709C8 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13CQ709C8 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13CQ709C8 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 CARS-214ENST00000529772 2637 ntTSL 2 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13CQ709C8 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 CXXC1P1-202ENST00000489409 1212 ntBASIC11.04□□□□□ -0.64
VPS13CQ709C8 PRDX2P3-201ENST00000515779 586 ntBASIC11.04□□□□□ -0.64
VPS13CQ709C8 AC103810.4-201ENST00000578601 257 ntBASIC11.04□□□□□ -0.64
VPS13CQ709C8 RN7SL322P-201ENST00000583519 299 ntBASIC11.04□□□□□ -0.64
VPS13CQ709C8 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 BAP1-211ENST00000615113 489 ntBASIC11.04□□□□□ -0.64
VPS13CQ709C8 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13CQ709C8 AL356583.1-201ENST00000398739 1371 ntBASIC11.04□□□□□ -0.64
VPS13CQ709C8 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13CQ709C8 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13CQ709C8 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13CQ709C8 FRG1-201ENST00000226798 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13CQ709C8 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13CQ709C8 TUBB8P9-201ENST00000422534 1276 ntBASIC11.04□□□□□ -0.64
VPS13CQ709C8 TUBB8P10-201ENST00000430210 1279 ntBASIC11.04□□□□□ -0.64
VPS13CQ709C8 AL669831.4-201ENST00000447500 872 ntTSL 5 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 FOS-205ENST00000555242 629 ntTSL 2 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 RN7SL5P-201ENST00000581458 321 ntBASIC11.04□□□□□ -0.64
VPS13CQ709C8 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13CQ709C8 RN7SL827P-201ENST00000607480 288 ntBASIC11.04□□□□□ -0.64
VPS13CQ709C8 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13CQ709C8 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13CQ709C8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13CQ709C8 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13CQ709C8 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13CQ709C8 NBEAP3-201ENST00000420638 1493 ntBASIC11.04□□□□□ -0.64
VPS13CQ709C8 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13CQ709C8 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
VPS13CQ709C8 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC11.04□□□□□ -0.64
VPS13CQ709C8 AC073488.1-201ENST00000416620 1600 ntBASIC11.03□□□□□ -0.64
VPS13CQ709C8 NME1-209ENST00000511355 1645 ntTSL 5 BASIC11.03□□□□□ -0.64
VPS13CQ709C8 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
VPS13CQ709C8 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
VPS13CQ709C8 AC010677.1-201ENST00000441690 412 ntBASIC11.03□□□□□ -0.64
VPS13CQ709C8 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
VPS13CQ709C8 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC11.03□□□□□ -0.64
VPS13CQ709C8 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
VPS13CQ709C8 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC11.03□□□□□ -0.64
VPS13CQ709C8 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC11.03□□□□□ -0.64
VPS13CQ709C8 MIR1587-201ENST00000583319 53 ntBASIC11.03□□□□□ -0.64
VPS13CQ709C8 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms