Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 AKR1C5P-201ENST00000427165 609 ntBASIC13.17□□□□□ -0.3
RIF1Q5UIP0 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 PTS-204ENST00000525803 625 ntTSL 3 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 AC002351.1-201ENST00000546852 590 ntTSL 2 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 AC099795.2-201ENST00000639582 440 ntBASIC13.17□□□□□ -0.3
RIF1Q5UIP0 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
RIF1Q5UIP0 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 AC132872.4-202ENST00000622924 2756 ntBASIC13.16□□□□□ -0.3
RIF1Q5UIP0 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 LINC01763-201ENST00000425185 1547 ntTSL 3 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 LDHAL6FP-201ENST00000405916 1082 ntBASIC13.16□□□□□ -0.3
RIF1Q5UIP0 AP000343.1-201ENST00000440602 385 ntBASIC13.16□□□□□ -0.3
RIF1Q5UIP0 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 RAB42P1-201ENST00000555078 316 ntBASIC13.16□□□□□ -0.3
RIF1Q5UIP0 PIMREG-209ENST00000576056 833 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 OPN1MW-201ENST00000595290 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 NR1I2-207ENST00000640105 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 AC020658.6-201ENST00000623564 1870 ntBASIC13.16□□□□□ -0.3
RIF1Q5UIP0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 KRTAP10-8-201ENST00000334662 876 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 AC118758.1-201ENST00000448242 564 ntTSL 4 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 AC023886.1-202ENST00000504009 477 ntTSL 3 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 AL606834.1-201ENST00000553836 1169 ntBASIC13.16□□□□□ -0.3
RIF1Q5UIP0 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 AL512631.1-201ENST00000604086 840 ntBASIC13.16□□□□□ -0.3
RIF1Q5UIP0 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 AC008038.1-201ENST00000634247 1314 ntBASIC13.16□□□□□ -0.3
RIF1Q5UIP0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 DDC-204ENST00000426377 1700 ntTSL 3 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
RIF1Q5UIP0 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
RIF1Q5UIP0 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms