Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 OR7E122P-201ENST00000383606 1017 ntBASIC17.01■□□□□ 0.31
RC3H1Q5TC82 CROT-203ENST00000419147 2959 ntTSL 2 BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 TUBB8P9-201ENST00000422534 1276 ntBASIC17.01■□□□□ 0.31
RC3H1Q5TC82 TUBB8P10-201ENST00000430210 1279 ntBASIC17.01■□□□□ 0.31
RC3H1Q5TC82 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 AC004895.1-202ENST00000435547 547 ntTSL 5 BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 AP001120.3-201ENST00000585729 489 ntBASIC17.01■□□□□ 0.31
RC3H1Q5TC82 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 AC022001.3-201ENST00000606330 596 ntBASIC17.01■□□□□ 0.31
RC3H1Q5TC82 LINC00643-207ENST00000637212 734 ntBASIC17.01■□□□□ 0.31
RC3H1Q5TC82 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 DDX11L1-202ENST00000456328 1657 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 DDX11L10-202ENST00000513886 1652 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 DDX11L9-203ENST00000562189 1652 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
RC3H1Q5TC82 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 ZSCAN5DP-201ENST00000600684 1488 ntBASIC17■□□□□ 0.31
RC3H1Q5TC82 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC17■□□□□ 0.31
RC3H1Q5TC82 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17■□□□□ 0.31
RC3H1Q5TC82 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RC3H1Q5TC82 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 TEDDM2P-201ENST00000414169 786 ntBASIC17■□□□□ 0.31
RC3H1Q5TC82 AC026884.1-201ENST00000418296 457 ntBASIC17■□□□□ 0.31
RC3H1Q5TC82 STK33P1-201ENST00000423835 1218 ntBASIC17■□□□□ 0.31
RC3H1Q5TC82 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC17■□□□□ 0.31
RC3H1Q5TC82 AP000343.1-201ENST00000440602 385 ntBASIC17■□□□□ 0.31
RC3H1Q5TC82 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC17■□□□□ 0.31
RC3H1Q5TC82 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17■□□□□ 0.31
RC3H1Q5TC82 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC17■□□□□ 0.31
RC3H1Q5TC82 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC17■□□□□ 0.31
RC3H1Q5TC82 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC17■□□□□ 0.31
RC3H1Q5TC82 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RC3H1Q5TC82 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RC3H1Q5TC82 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
RC3H1Q5TC82 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17■□□□□ 0.31
RC3H1Q5TC82 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC17■□□□□ 0.31
RC3H1Q5TC82 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC17■□□□□ 0.31
RC3H1Q5TC82 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RC3H1Q5TC82 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17■□□□□ 0.31
RC3H1Q5TC82 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
RC3H1Q5TC82 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC17■□□□□ 0.31
RC3H1Q5TC82 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RC3H1Q5TC82 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 OR2T33-201ENST00000318021 1066 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC16.99■□□□□ 0.31
RC3H1Q5TC82 MKL1-204ENST00000402630 747 ntTSL 2 BASIC16.99■□□□□ 0.31
RC3H1Q5TC82 RPSAP61-201ENST00000412542 878 ntBASIC16.99■□□□□ 0.31
RC3H1Q5TC82 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 316.7 ms