Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 STK16-202ENST00000409260 1493 ntTSL 5 BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHROOM1Q2M3G4 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 PCDHA3-202ENST00000532566 4594 ntBASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 BCL2L12P1-201ENST00000508390 733 ntBASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 NAA38-204ENST00000575208 529 ntTSL 3 BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 RN7SL121P-201ENST00000584223 273 ntBASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 AC018695.6-201ENST00000614011 534 ntBASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 AC067930.6-201ENST00000623257 4947 ntBASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.96■□□□□ 0.15
SHROOM1Q2M3G4 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.14
SHROOM1Q2M3G4 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
SHROOM1Q2M3G4 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 PHBP10-201ENST00000416467 784 ntBASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 AC133141.1-201ENST00000443015 339 ntBASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 METTL7AP1-201ENST00000547343 496 ntBASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 KRT8P34-201ENST00000577607 1044 ntBASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 AC123912.6-201ENST00000612657 315 ntBASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.95■□□□□ 0.14
SHROOM1Q2M3G4 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM1Q2M3G4 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM1Q2M3G4 AC023794.5-201ENST00000564380 2157 ntBASIC15.94■□□□□ 0.14
SHROOM1Q2M3G4 AC007336.3-201ENST00000623886 2160 ntBASIC15.94■□□□□ 0.14
SHROOM1Q2M3G4 AC020931.1-201ENST00000589622 1346 ntBASIC15.94■□□□□ 0.14
SHROOM1Q2M3G4 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM1Q2M3G4 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.94■□□□□ 0.14
SHROOM1Q2M3G4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.94■□□□□ 0.14
SHROOM1Q2M3G4 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC15.94■□□□□ 0.14
SHROOM1Q2M3G4 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM1Q2M3G4 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SHROOM1Q2M3G4 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms