Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 RN7SL846P-201ENST00000467429 292 ntBASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 AL033381.2-201ENST00000603854 732 ntBASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 COG6-212ENST00000630730 186 ntTSL 5 BASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC19.19■□□□□ 0.66
SPHKAPQ2M3C7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 CDC42-202ENST00000344548 2256 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 AP002414.2-201ENST00000591780 3365 ntBASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 ASS1P1-201ENST00000402854 1237 ntBASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 AC053503.3-201ENST00000448375 114 ntBASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 AL161727.1-201ENST00000457409 530 ntBASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 AF186996.6-201ENST00000485294 149 ntBASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 AL590556.2-202ENST00000636906 844 ntBASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 SLC26A5-203ENST00000354356 2686 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 AC005549.1-201ENST00000579438 1629 ntBASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 CETP-203ENST00000566128 1733 ntTSL 5 BASIC19.18■□□□□ 0.66
SPHKAPQ2M3C7 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 HINT1-204ENST00000506908 681 ntTSL 2 BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 AC009093.9-201ENST00000566038 1611 ntBASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 AL359881.3-201ENST00000602640 1721 ntBASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 RHCE-203ENST00000346452 971 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 HIST1H3H-201ENST00000369163 1237 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 RN7SL478P-201ENST00000584358 298 ntBASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC19.17■□□□□ 0.66
SPHKAPQ2M3C7 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPHKAPQ2M3C7 MSNP1-201ENST00000511640 1732 ntBASIC19.16■□□□□ 0.66
SPHKAPQ2M3C7 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPHKAPQ2M3C7 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC19.16■□□□□ 0.66
SPHKAPQ2M3C7 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPHKAPQ2M3C7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPHKAPQ2M3C7 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SPHKAPQ2M3C7 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPHKAPQ2M3C7 CD9-212ENST00000610354 1315 ntTSL 5 BASIC19.16■□□□□ 0.66
SPHKAPQ2M3C7 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPHKAPQ2M3C7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPHKAPQ2M3C7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SPHKAPQ2M3C7 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms