Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
AP3S2P59780 KLF2P3-201ENST00000451977 1087 ntBASIC11.95□□□□□ -0.5
AP3S2P59780 AC009477.1-201ENST00000452936 217 ntBASIC11.95□□□□□ -0.5
AP3S2P59780 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC11.95□□□□□ -0.5
AP3S2P59780 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC11.95□□□□□ -0.5
AP3S2P59780 SPDYE18-201ENST00000510091 1050 ntBASIC11.95□□□□□ -0.5
AP3S2P59780 PGAM5P1-201ENST00000518923 814 ntBASIC11.95□□□□□ -0.5
AP3S2P59780 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC11.95□□□□□ -0.5
AP3S2P59780 RN7SL48P-201ENST00000579283 293 ntBASIC11.95□□□□□ -0.5
AP3S2P59780 AL356740.1-201ENST00000602192 1297 ntBASIC11.95□□□□□ -0.5
AP3S2P59780 AC010503.4-201ENST00000615487 688 ntBASIC11.95□□□□□ -0.5
AP3S2P59780 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC11.95□□□□□ -0.5
AP3S2P59780 AC006033.2-201ENST00000609522 1968 ntTSL 2 BASIC11.95□□□□□ -0.5
AP3S2P59780 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
AP3S2P59780 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC11.95□□□□□ -0.5
AP3S2P59780 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC11.95□□□□□ -0.5
AP3S2P59780 KCTD21-AS1-207ENST00000600795 1549 ntBASIC11.95□□□□□ -0.5
AP3S2P59780 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC11.95□□□□□ -0.5
AP3S2P59780 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 STK26-204ENST00000481105 1835 ntTSL 2 BASIC11.95□□□□□ -0.5
AP3S2P59780 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
AP3S2P59780 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP3S2P59780 SLC26A4-201ENST00000265715 4930 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
AP3S2P59780 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
AP3S2P59780 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
AP3S2P59780 ABLIM3-203ENST00000356541 2290 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC11.94□□□□□ -0.5
AP3S2P59780 ABLIM3-211ENST00000517451 2287 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 PALLD-209ENST00000507735 4379 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC11.94□□□□□ -0.5
AP3S2P59780 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 CICP9-201ENST00000444451 1913 ntBASIC11.94□□□□□ -0.5
AP3S2P59780 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC11.94□□□□□ -0.5
AP3S2P59780 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
AP3S2P59780 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC11.94□□□□□ -0.5
AP3S2P59780 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC11.94□□□□□ -0.5
AP3S2P59780 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC11.94□□□□□ -0.5
AP3S2P59780 AL139158.3-201ENST00000641212 1562 ntBASIC11.94□□□□□ -0.5
AP3S2P59780 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
AP3S2P59780 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC11.94□□□□□ -0.5
AP3S2P59780 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 AC107890.1-201ENST00000422478 521 ntBASIC11.94□□□□□ -0.5
AP3S2P59780 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC11.94□□□□□ -0.5
AP3S2P59780 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC11.94□□□□□ -0.5
AP3S2P59780 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 MYCLP2-201ENST00000449268 967 ntBASIC11.94□□□□□ -0.5
AP3S2P59780 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.94□□□□□ -0.5
AP3S2P59780 KRT18P58-201ENST00000527480 1120 ntBASIC11.94□□□□□ -0.5
AP3S2P59780 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC11.94□□□□□ -0.5
AP3S2P59780 DAD1-205ENST00000543337 501 ntTSL 3 BASIC11.94□□□□□ -0.5
AP3S2P59780 AC140658.4-201ENST00000561990 352 ntBASIC11.94□□□□□ -0.5
AP3S2P59780 AP001063.1-201ENST00000568332 529 ntBASIC11.94□□□□□ -0.5
AP3S2P59780 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC11.94□□□□□ -0.5
AP3S2P59780 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 AL158211.3-201ENST00000607385 239 ntBASIC11.94□□□□□ -0.5
AP3S2P59780 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC11.94□□□□□ -0.5
AP3S2P59780 AC090386.2-201ENST00000623010 1039 ntBASIC11.94□□□□□ -0.5
AP3S2P59780 AL590560.3-201ENST00000623350 461 ntBASIC11.94□□□□□ -0.5
AP3S2P59780 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 AC091181.1-201ENST00000623762 2098 ntBASIC11.94□□□□□ -0.5
AP3S2P59780 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 STX3-207ENST00000633708 3111 ntTSL 5 BASIC11.94□□□□□ -0.5
AP3S2P59780 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC11.94□□□□□ -0.5
AP3S2P59780 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
AP3S2P59780 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
AP3S2P59780 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC11.94□□□□□ -0.5
AP3S2P59780 CTAGE10P-201ENST00000318353 2408 ntBASIC11.94□□□□□ -0.5
AP3S2P59780 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP3S2P59780 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
AP3S2P59780 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S2P59780 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S2P59780 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S2P59780 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S2P59780 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S2P59780 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S2P59780 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
AP3S2P59780 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S2P59780 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC11.93□□□□□ -0.5
AP3S2P59780 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC11.93□□□□□ -0.5
AP3S2P59780 AC008764.8-201ENST00000623966 2717 ntBASIC11.93□□□□□ -0.5
AP3S2P59780 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP3S2P59780 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms