Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 AC239868.1-201ENST00000369385 493 ntBASIC12.89□□□□□ -0.35
HTR3AP46098 CRCP-204ENST00000398684 492 ntTSL 2 BASIC12.89□□□□□ -0.35
HTR3AP46098 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.89□□□□□ -0.35
HTR3AP46098 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 AC244107.1-201ENST00000442033 332 ntBASIC12.89□□□□□ -0.35
HTR3AP46098 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HTR3AP46098 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.89□□□□□ -0.35
HTR3AP46098 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.89□□□□□ -0.35
HTR3AP46098 RN7SL277P-201ENST00000481521 288 ntBASIC12.89□□□□□ -0.35
HTR3AP46098 AC092658.1-201ENST00000505836 891 ntBASIC12.89□□□□□ -0.35
HTR3AP46098 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
HTR3AP46098 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.89□□□□□ -0.35
HTR3AP46098 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.89□□□□□ -0.35
HTR3AP46098 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 KC6-205ENST00000599934 556 ntTSL 4 BASIC12.89□□□□□ -0.35
HTR3AP46098 AC243960.2-201ENST00000600996 747 ntBASIC12.89□□□□□ -0.35
HTR3AP46098 AL451050.2-201ENST00000606967 682 ntBASIC12.89□□□□□ -0.35
HTR3AP46098 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.89□□□□□ -0.35
HTR3AP46098 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
HTR3AP46098 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC12.89□□□□□ -0.35
HTR3AP46098 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.89□□□□□ -0.35
HTR3AP46098 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.89□□□□□ -0.35
HTR3AP46098 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 AL157791.1-201ENST00000553667 1699 ntBASIC12.89□□□□□ -0.35
HTR3AP46098 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HTR3AP46098 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
HTR3AP46098 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HTR3AP46098 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.88□□□□□ -0.35
HTR3AP46098 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.88□□□□□ -0.35
HTR3AP46098 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
HTR3AP46098 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
HTR3AP46098 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.88□□□□□ -0.35
HTR3AP46098 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
HTR3AP46098 FAM90A11P-201ENST00000518378 2218 ntBASIC12.88□□□□□ -0.35
HTR3AP46098 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.88□□□□□ -0.35
HTR3AP46098 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
HTR3AP46098 FAM86MP-201ENST00000340703 885 ntBASIC12.88□□□□□ -0.35
HTR3AP46098 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.88□□□□□ -0.35
HTR3AP46098 AC006987.1-201ENST00000413610 527 ntBASIC12.88□□□□□ -0.35
HTR3AP46098 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.88□□□□□ -0.35
HTR3AP46098 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
HTR3AP46098 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
HTR3AP46098 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.88□□□□□ -0.35
HTR3AP46098 KRT8P13-201ENST00000463294 1010 ntBASIC12.88□□□□□ -0.35
HTR3AP46098 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.88□□□□□ -0.35
HTR3AP46098 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.88□□□□□ -0.35
HTR3AP46098 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.88□□□□□ -0.35
HTR3AP46098 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC12.88□□□□□ -0.35
HTR3AP46098 AC090857.1-201ENST00000527400 390 ntBASIC12.88□□□□□ -0.35
HTR3AP46098 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.88□□□□□ -0.35
HTR3AP46098 KRT8P1-201ENST00000557533 1207 ntBASIC12.88□□□□□ -0.35
HTR3AP46098 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.88□□□□□ -0.35
HTR3AP46098 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.88□□□□□ -0.35
HTR3AP46098 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC12.88□□□□□ -0.35
HTR3AP46098 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 AL645939.5-201ENST00000606834 243 ntBASIC12.88□□□□□ -0.35
HTR3AP46098 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
HTR3AP46098 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.88□□□□□ -0.35
HTR3AP46098 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
HTR3AP46098 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.88□□□□□ -0.35
HTR3AP46098 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.88□□□□□ -0.35
HTR3AP46098 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
HTR3AP46098 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms