Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 KRT17P4-201ENST00000429445 819 ntBASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 KRT18P37-201ENST00000520711 1282 ntBASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 GOLGA2P7-209ENST00000560408 745 ntBASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 AP005264.6-204ENST00000588436 719 ntBASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.57□□□□□ -0.08
SHKBP1Q8TBC3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 AC073210.1-201ENST00000414799 232 ntBASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 EEF1DP2-201ENST00000433698 843 ntBASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 KRT18P46-201ENST00000435568 1279 ntBASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 CD81-209ENST00000492627 886 ntTSL 3 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 THY1-209ENST00000580275 578 ntTSL 3 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 RN7SL556P-201ENST00000582856 298 ntBASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 AC006483.2-201ENST00000609813 515 ntBASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 AC023794.5-201ENST00000564380 2157 ntBASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 OR2I1P-210ENST00000642037 4691 ntBASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SHKBP1Q8TBC3 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC14.55□□□□□ -0.08
SHKBP1Q8TBC3 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms