Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 RPL18AP8-201ENST00000486071 528 ntBASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 RTN3P1-201ENST00000536295 711 ntBASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 RN7SL665P-201ENST00000578793 300 ntBASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 AL031673.1-201ENST00000611460 466 ntBASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 GARS-210ENST00000627489 324 ntTSL 4 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 AC073862.5-201ENST00000624129 2027 ntBASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDH19Q8TAB3 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
PCDH19Q8TAB3 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.33□□□□□ -0.11
PCDH19Q8TAB3 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDH19Q8TAB3 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.33□□□□□ -0.11
PCDH19Q8TAB3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PCDH19Q8TAB3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.33□□□□□ -0.11
PCDH19Q8TAB3 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC14.33□□□□□ -0.11
PCDH19Q8TAB3 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PCDH19Q8TAB3 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 MAGEA5-201ENST00000446757 942 ntBASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 AC234782.1-201ENST00000451950 919 ntBASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 MIR3677-201ENST00000578964 60 ntBASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 AC012044.1-201ENST00000603431 297 ntBASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 AC009560.1-201ENST00000620208 434 ntBASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 FAM90A2P-201ENST00000511144 1395 ntBASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 FAM90A25P-201ENST00000528404 1395 ntBASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.33□□□□□ -0.12
PCDH19Q8TAB3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PCDH19Q8TAB3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms