Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 CECR2-201ENST00000262608 4783 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
SVIPQ8NHG7 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SVIPQ8NHG7 DOK6-201ENST00000382713 8890 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
SVIPQ8NHG7 NEK1-201ENST00000439128 5653 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
SVIPQ8NHG7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
SVIPQ8NHG7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC8.18□□□□□ -1.1
SVIPQ8NHG7 AC020904.2-201ENST00000621646 1669 ntTSL 3 BASIC8.18□□□□□ -1.1
SVIPQ8NHG7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 BHLHE40-201ENST00000256495 3473 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 GRIK1-204ENST00000399907 3472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 NAP1L3-201ENST00000373079 2639 ntAPPRIS P2 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 AC009948.3-201ENST00000603415 1798 ntBASIC8.17□□□□□ -1.1
SVIPQ8NHG7 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 AC002519.1-201ENST00000570073 2792 ntBASIC8.17□□□□□ -1.1
SVIPQ8NHG7 ZNF525-203ENST00000475179 1868 ntTSL 2 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 RPL23-206ENST00000479035 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 BCL2L13-207ENST00000418951 5062 ntTSL 3 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 PBRM1-201ENST00000296302 5145 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 SLITRK1-201ENST00000377084 5189 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 AL035696.3-201ENST00000580119 2050 ntTSL 2 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 NWD1-205ENST00000549814 6614 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 LHX6-203ENST00000373755 3384 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 CTAGE9-201ENST00000314099 2334 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 SULF1-203ENST00000419716 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 CCDC40-203ENST00000374877 3544 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 TMEM18-202ENST00000355654 2376 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 MRPL27-202ENST00000442592 2441 ntTSL 2 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 DPP6-201ENST00000332007 3768 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 RPS2P7-201ENST00000447334 885 ntBASIC8.17□□□□□ -1.1
SVIPQ8NHG7 AP002371.1-201ENST00000463604 433 ntBASIC8.17□□□□□ -1.1
SVIPQ8NHG7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 AL133372.1-201ENST00000493565 745 ntBASIC8.17□□□□□ -1.1
SVIPQ8NHG7 TSPAN5-202ENST00000505184 1191 ntTSL 2 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 HTATIP2-206ENST00000531058 1060 ntTSL 3 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 AC124068.2-201ENST00000569473 1109 ntBASIC8.17□□□□□ -1.1
SVIPQ8NHG7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 HDAC1P2-202ENST00000602936 807 ntBASIC8.17□□□□□ -1.1
SVIPQ8NHG7 GRAMD4P8-201ENST00000605465 1115 ntBASIC8.17□□□□□ -1.1
SVIPQ8NHG7 Metazoa_SRP.138-201ENST00000615369 298 ntBASIC8.17□□□□□ -1.1
SVIPQ8NHG7 AC100791.3-201ENST00000617619 330 ntBASIC8.17□□□□□ -1.1
SVIPQ8NHG7 RFC1-217ENST00000639695 867 ntTSL 5 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 TNIK-203ENST00000357327 3996 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 OSBPL3-202ENST00000396429 2707 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 CAMK2D-213ENST00000514328 1497 ntTSL 5 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 AC009303.4-201ENST00000623784 1500 ntBASIC8.17□□□□□ -1.1
SVIPQ8NHG7 PCBP2-205ENST00000447282 3077 ntTSL 5 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 PCGF2-204ENST00000616199 3062 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 CEP83-201ENST00000339839 3130 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 LINC01104-202ENST00000452354 3115 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 AC034238.1-214ENST00000609699 1590 ntTSL 5 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 CASP12-203ENST00000422698 1685 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 AHSG-202ENST00000411641 1711 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 NDST2-201ENST00000299641 3535 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 AL022323.3-201ENST00000623888 5388 ntBASIC8.17□□□□□ -1.1
SVIPQ8NHG7 ZNF587-202ENST00000419854 5731 ntTSL 2 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 DSP-201ENST00000379802 9796 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 APTX-206ENST00000379825 2023 ntTSL 2 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 NEK10-204ENST00000383771 2023 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 MYOCOS-201ENST00000636697 2100 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 TMEM94-202ENST00000375248 4703 ntTSL 2 BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 TNFRSF11B-201ENST00000297350 2402 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
SVIPQ8NHG7 UNC45A-202ENST00000418476 3252 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
SVIPQ8NHG7 VTA1-205ENST00000620996 3272 ntTSL 3 BASIC8.16□□□□□ -1.1
SVIPQ8NHG7 RNF138-202ENST00000261593 3570 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SVIPQ8NHG7 PIGO-203ENST00000378617 4066 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SVIPQ8NHG7 SLC16A1-AS1-204ENST00000428411 8757 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SVIPQ8NHG7 FCRLA-201ENST00000236938 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
SVIPQ8NHG7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SVIPQ8NHG7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
SVIPQ8NHG7 DDX19B-201ENST00000288071 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SVIPQ8NHG7 EGFLAM-201ENST00000322350 4411 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
SVIPQ8NHG7 DDIT3-201ENST00000346473 906 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SVIPQ8NHG7 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC8.16□□□□□ -1.1
SVIPQ8NHG7 KEL-201ENST00000355265 2812 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
SVIPQ8NHG7 FCRL3-201ENST00000368184 4725 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
SVIPQ8NHG7 HDGF-202ENST00000368206 960 ntTSL 5 BASIC8.16□□□□□ -1.1
SVIPQ8NHG7 LRRC27-202ENST00000368612 1765 ntTSL 2 BASIC8.16□□□□□ -1.1
SVIPQ8NHG7 SARS-202ENST00000369923 1882 ntTSL 5 BASIC8.16□□□□□ -1.1
SVIPQ8NHG7 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
SVIPQ8NHG7 TRIM39-202ENST00000376659 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms