Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 AC083964.2-201ENST00000623988 2396 ntBASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CTC1Q2NKJ3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 AC012617.1-204ENST00000586340 2305 ntBASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 OR2I1P-210ENST00000642037 4691 ntBASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 AC092903.1-201ENST00000466506 262 ntBASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 ETFRF1-205ENST00000555711 783 ntTSL 3 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 AC108359.1-201ENST00000616451 1211 ntBASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CTC1Q2NKJ3 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 FLJ16779-201ENST00000612722 7638 ntBASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 AC022080.1-201ENST00000366255 781 ntBASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 AC027612.2-202ENST00000445955 1199 ntBASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 AC113347.2-201ENST00000512350 279 ntBASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 AC233280.19-201ENST00000633223 136 ntBASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CTC1Q2NKJ3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms