Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.45□□□□□ -0.1
CBX1P83916 C16orf82-202ENST00000505035 2459 ntAPPRIS P5 BASIC14.45□□□□□ -0.1
CBX1P83916 GCOM2-201ENST00000509133 1104 ntBASIC14.45□□□□□ -0.1
CBX1P83916 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.45□□□□□ -0.1
CBX1P83916 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.45□□□□□ -0.1
CBX1P83916 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.45□□□□□ -0.1
CBX1P83916 ELP4-212ENST00000638764 2456 ntTSL 5 BASIC14.45□□□□□ -0.1
CBX1P83916 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 CHID1-204ENST00000449825 3537 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CBX1P83916 E2F8-205ENST00000620009 3519 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CBX1P83916 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CBX1P83916 RPL10-218ENST00000618723 2210 ntTSL 5 BASIC14.45□□□□□ -0.1
CBX1P83916 WARS-202ENST00000355338 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CBX1P83916 AC008040.5-201ENST00000599781 1781 ntBASIC14.45□□□□□ -0.1
CBX1P83916 PLEKHM1-201ENST00000430334 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CBX1P83916 SLC2A4-201ENST00000317370 3426 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CBX1P83916 CYTH2-213ENST00000620214 2020 ntTSL 5 BASIC14.44□□□□□ -0.1
CBX1P83916 TRAK1-206ENST00000449246 3260 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CBX1P83916 CIZ1-225ENST00000538431 2996 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CBX1P83916 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC14.44□□□□□ -0.1
CBX1P83916 COIL-201ENST00000240316 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CBX1P83916 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CBX1P83916 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CBX1P83916 HERC2P3-208ENST00000430598 4279 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CBX1P83916 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CBX1P83916 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CBX1P83916 AC002056.1-201ENST00000395613 760 ntBASIC14.44□□□□□ -0.1
CBX1P83916 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.44□□□□□ -0.1
CBX1P83916 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
CBX1P83916 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.44□□□□□ -0.1
CBX1P83916 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.44□□□□□ -0.1
CBX1P83916 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.44□□□□□ -0.1
CBX1P83916 KRT19P2-202ENST00000557173 1012 ntBASIC14.44□□□□□ -0.1
CBX1P83916 RARRES2P8-201ENST00000566335 367 ntBASIC14.44□□□□□ -0.1
CBX1P83916 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CBX1P83916 SLC25A6P4-201ENST00000586535 553 ntBASIC14.44□□□□□ -0.1
CBX1P83916 AC068137.2-201ENST00000605408 478 ntBASIC14.44□□□□□ -0.1
CBX1P83916 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.44□□□□□ -0.1
CBX1P83916 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.44□□□□□ -0.1
CBX1P83916 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CBX1P83916 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.44□□□□□ -0.1
CBX1P83916 ISL1-201ENST00000230658 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CBX1P83916 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CBX1P83916 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CBX1P83916 PRKAG1-205ENST00000547306 1531 ntTSL 5 BASIC14.44□□□□□ -0.1
CBX1P83916 ZHX1-206ENST00000522655 3357 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CBX1P83916 MARVELD2-201ENST00000325631 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CBX1P83916 NUMB-212ENST00000554546 3607 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CBX1P83916 GDA-203ENST00000376986 1771 ntTSL 2 BASIC14.44□□□□□ -0.1
CBX1P83916 AMPD2-201ENST00000256578 3899 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
CBX1P83916 SMG6-201ENST00000263073 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CBX1P83916 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.44□□□□□ -0.1
CBX1P83916 EZR-201ENST00000337147 3068 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CBX1P83916 PKM-222ENST00000568883 1863 ntTSL 5 BASIC14.44□□□□□ -0.1
CBX1P83916 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CBX1P83916 NAGA-201ENST00000396398 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CBX1P83916 DDI1-201ENST00000302259 2609 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CBX1P83916 PMEL-204ENST00000548493 2204 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
CBX1P83916 ZNF213-AS1-204ENST00000572691 3232 ntTSL 5 BASIC14.43□□□□□ -0.1
CBX1P83916 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CBX1P83916 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CBX1P83916 RDH16-202ENST00000398138 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX1P83916 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.43□□□□□ -0.1
CBX1P83916 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
CBX1P83916 ATP2A1-203ENST00000536376 3130 ntTSL 2 BASIC14.43□□□□□ -0.1
CBX1P83916 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CBX1P83916 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX1P83916 LINC00365-201ENST00000413591 2618 ntTSL 3 BASIC14.43□□□□□ -0.1
CBX1P83916 ARL3-201ENST00000260746 3844 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX1P83916 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX1P83916 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CBX1P83916 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CBX1P83916 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.43□□□□□ -0.1
CBX1P83916 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CBX1P83916 TUBB2BP1-201ENST00000404155 871 ntBASIC14.43□□□□□ -0.1
CBX1P83916 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.43□□□□□ -0.1
CBX1P83916 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CBX1P83916 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX1P83916 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CBX1P83916 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.43□□□□□ -0.1
CBX1P83916 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.43□□□□□ -0.1
CBX1P83916 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.43□□□□□ -0.1
CBX1P83916 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.43□□□□□ -0.1
CBX1P83916 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.43□□□□□ -0.1
CBX1P83916 AL121912.1-201ENST00000603683 238 ntBASIC14.43□□□□□ -0.1
CBX1P83916 DLGAP4-203ENST00000373907 3337 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CBX1P83916 ARHGEF10-203ENST00000398560 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX1P83916 SLC5A11-209ENST00000567758 2246 ntTSL 5 BASIC14.43□□□□□ -0.1
CBX1P83916 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CBX1P83916 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CBX1P83916 AL117378.1-201ENST00000454596 2305 ntTSL 2 BASIC14.43□□□□□ -0.1
CBX1P83916 SIRPG-202ENST00000303415 1716 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms