Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC20.04■□□□□ 0.8
KDM5CP41229 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
KDM5CP41229 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
KDM5CP41229 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC20.04■□□□□ 0.8
KDM5CP41229 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KDM5CP41229 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
KDM5CP41229 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC20.04■□□□□ 0.8
KDM5CP41229 HNRNPABP1-201ENST00000406003 734 ntBASIC20.04■□□□□ 0.8
KDM5CP41229 AC116347.1-201ENST00000442824 720 ntBASIC20.04■□□□□ 0.8
KDM5CP41229 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC20.04■□□□□ 0.8
KDM5CP41229 AC063924.1-201ENST00000546680 673 ntBASIC20.04■□□□□ 0.8
KDM5CP41229 AC090950.1-202ENST00000605733 644 ntBASIC20.04■□□□□ 0.8
KDM5CP41229 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
KDM5CP41229 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC20.04■□□□□ 0.8
KDM5CP41229 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KDM5CP41229 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KDM5CP41229 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KDM5CP41229 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC20.03■□□□□ 0.8
KDM5CP41229 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KDM5CP41229 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
KDM5CP41229 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC20.03■□□□□ 0.8
KDM5CP41229 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
KDM5CP41229 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KDM5CP41229 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KDM5CP41229 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC20.03■□□□□ 0.8
KDM5CP41229 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC20.03■□□□□ 0.8
KDM5CP41229 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC20.03■□□□□ 0.8
KDM5CP41229 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KDM5CP41229 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
KDM5CP41229 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
KDM5CP41229 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KDM5CP41229 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KDM5CP41229 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC20.03■□□□□ 0.8
KDM5CP41229 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KDM5CP41229 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
KDM5CP41229 AC010677.1-201ENST00000441690 412 ntBASIC20.03■□□□□ 0.8
KDM5CP41229 AL137077.1-201ENST00000442115 528 ntBASIC20.03■□□□□ 0.8
KDM5CP41229 PRDX2P3-201ENST00000515779 586 ntBASIC20.03■□□□□ 0.8
KDM5CP41229 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC20.03■□□□□ 0.8
KDM5CP41229 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KDM5CP41229 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KDM5CP41229 MFSD12-215ENST00000615613 688 ntBASIC20.03■□□□□ 0.8
KDM5CP41229 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KDM5CP41229 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KDM5CP41229 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KDM5CP41229 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KDM5CP41229 KATNAL1-202ENST00000380617 1634 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KDM5CP41229 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC20.03■□□□□ 0.8
KDM5CP41229 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KDM5CP41229 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
KDM5CP41229 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KDM5CP41229 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KDM5CP41229 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KDM5CP41229 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KDM5CP41229 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KDM5CP41229 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KDM5CP41229 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KDM5CP41229 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
KDM5CP41229 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KDM5CP41229 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KDM5CP41229 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
KDM5CP41229 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KDM5CP41229 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC20.02■□□□□ 0.8
KDM5CP41229 USP8-219ENST00000625664 1568 ntTSL 5 BASIC20.02■□□□□ 0.8
KDM5CP41229 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC20.02■□□□□ 0.8
KDM5CP41229 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KDM5CP41229 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KDM5CP41229 MRPL55-207ENST00000366733 834 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
KDM5CP41229 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC20.02■□□□□ 0.8
KDM5CP41229 RN7SL452P-201ENST00000482923 291 ntBASIC20.02■□□□□ 0.8
KDM5CP41229 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC20.02■□□□□ 0.8
KDM5CP41229 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC20.02■□□□□ 0.8
KDM5CP41229 SLC50A1-214ENST00000622581 1245 ntTSL 5 BASIC20.02■□□□□ 0.8
KDM5CP41229 AC138430.2-201ENST00000624068 504 ntBASIC20.02■□□□□ 0.8
KDM5CP41229 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KDM5CP41229 AC041040.2-201ENST00000622926 2899 ntBASIC20.02■□□□□ 0.8
KDM5CP41229 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KDM5CP41229 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC20.02■□□□□ 0.8
KDM5CP41229 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC20.02■□□□□ 0.8
KDM5CP41229 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
KDM5CP41229 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
KDM5CP41229 ZDHHC8P1-202ENST00000418264 1403 ntBASIC20.01■□□□□ 0.79
KDM5CP41229 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC20.01■□□□□ 0.79
KDM5CP41229 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC20.01■□□□□ 0.79
KDM5CP41229 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
KDM5CP41229 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KDM5CP41229 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
KDM5CP41229 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KDM5CP41229 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
KDM5CP41229 AL391903.1-201ENST00000407513 365 ntBASIC20.01■□□□□ 0.79
KDM5CP41229 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC20.01■□□□□ 0.79
KDM5CP41229 FTLP3-201ENST00000427242 528 ntBASIC20.01■□□□□ 0.79
KDM5CP41229 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC20.01■□□□□ 0.79
KDM5CP41229 AC007881.1-201ENST00000437460 187 ntBASIC20.01■□□□□ 0.79
KDM5CP41229 FOS-205ENST00000555242 629 ntTSL 2 BASIC20.01■□□□□ 0.79
KDM5CP41229 AL117379.1-201ENST00000619319 677 ntBASIC20.01■□□□□ 0.79
KDM5CP41229 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC20.01■□□□□ 0.79
KDM5CP41229 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC20.01■□□□□ 0.79
KDM5CP41229 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KDM5CP41229 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms