Protein–RNA interactions for Protein: P33991

MCM4, DNA replication licensing factor MCM4, humanhuman

Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4P33991 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.41■□□□□ 0.22
MCM4P33991 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.41■□□□□ 0.22
MCM4P33991 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.41■□□□□ 0.22
MCM4P33991 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.41■□□□□ 0.22
MCM4P33991 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MCM4P33991 AC021016.3-201ENST00000608367 477 ntBASIC16.41■□□□□ 0.22
MCM4P33991 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.41■□□□□ 0.22
MCM4P33991 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MCM4P33991 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
MCM4P33991 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MCM4P33991 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MCM4P33991 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MCM4P33991 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MCM4P33991 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MCM4P33991 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MCM4P33991 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MCM4P33991 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MCM4P33991 SHMT1P1-201ENST00000419974 1312 ntBASIC16.41■□□□□ 0.22
MCM4P33991 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
MCM4P33991 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC16.41■□□□□ 0.22
MCM4P33991 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MCM4P33991 CICP9-201ENST00000444451 1913 ntBASIC16.41■□□□□ 0.22
MCM4P33991 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MCM4P33991 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MCM4P33991 PRAME-201ENST00000398741 2202 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
MCM4P33991 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MCM4P33991 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MCM4P33991 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MCM4P33991 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MCM4P33991 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MCM4P33991 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC16.4■□□□□ 0.22
MCM4P33991 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
MCM4P33991 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC16.4■□□□□ 0.22
MCM4P33991 SYTL4-201ENST00000263033 2335 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MCM4P33991 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
MCM4P33991 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MCM4P33991 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MCM4P33991 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MCM4P33991 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MCM4P33991 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MCM4P33991 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MCM4P33991 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MCM4P33991 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.4■□□□□ 0.22
MCM4P33991 CNN2P8-201ENST00000421872 913 ntBASIC16.4■□□□□ 0.22
MCM4P33991 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.4■□□□□ 0.22
MCM4P33991 AL590640.2-201ENST00000457038 527 ntBASIC16.4■□□□□ 0.22
MCM4P33991 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.4■□□□□ 0.22
MCM4P33991 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.4■□□□□ 0.22
MCM4P33991 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.4■□□□□ 0.22
MCM4P33991 AC078819.1-201ENST00000547454 765 ntBASIC16.4■□□□□ 0.22
MCM4P33991 AC012085.1-201ENST00000548270 765 ntBASIC16.4■□□□□ 0.22
MCM4P33991 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.4■□□□□ 0.22
MCM4P33991 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.4■□□□□ 0.22
MCM4P33991 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.4■□□□□ 0.22
MCM4P33991 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.4■□□□□ 0.22
MCM4P33991 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MCM4P33991 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.4■□□□□ 0.22
MCM4P33991 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC16.4■□□□□ 0.22
MCM4P33991 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MCM4P33991 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MCM4P33991 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC16.4■□□□□ 0.22
MCM4P33991 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MCM4P33991 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC16.4■□□□□ 0.22
MCM4P33991 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MCM4P33991 PPP1R26P2-201ENST00000611403 3595 ntBASIC16.4■□□□□ 0.22
MCM4P33991 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MCM4P33991 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MCM4P33991 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC16.4■□□□□ 0.22
MCM4P33991 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MCM4P33991 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MCM4P33991 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
MCM4P33991 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.4■□□□□ 0.22
MCM4P33991 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
MCM4P33991 USP3-204ENST00000540797 5474 ntTSL 2 BASIC16.39■□□□□ 0.22
MCM4P33991 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.39■□□□□ 0.21
MCM4P33991 CTAGE13P-201ENST00000416709 2446 ntBASIC16.39■□□□□ 0.21
MCM4P33991 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
MCM4P33991 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
MCM4P33991 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MCM4P33991 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MCM4P33991 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MCM4P33991 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MCM4P33991 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.39■□□□□ 0.21
MCM4P33991 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MCM4P33991 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC16.39■□□□□ 0.21
MCM4P33991 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MCM4P33991 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MCM4P33991 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MCM4P33991 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MCM4P33991 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MCM4P33991 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MCM4P33991 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MCM4P33991 SSR4P1-201ENST00000415143 412 ntBASIC16.39■□□□□ 0.21
MCM4P33991 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.39■□□□□ 0.21
MCM4P33991 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.39■□□□□ 0.21
MCM4P33991 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MCM4P33991 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.39■□□□□ 0.21
MCM4P33991 YBX1P6-201ENST00000442962 1002 ntBASIC16.39■□□□□ 0.21
MCM4P33991 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MCM4P33991 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms