Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHMP24386 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC13.08□□□□□ -0.32
CHMP24386 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CHMP24386 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CHMP24386 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.07□□□□□ -0.32
CHMP24386 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CHMP24386 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CHMP24386 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.07□□□□□ -0.32
CHMP24386 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CHMP24386 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
CHMP24386 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
CHMP24386 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 AC239868.1-201ENST00000369385 493 ntBASIC13.07□□□□□ -0.32
CHMP24386 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 OR2R1P-201ENST00000441404 914 ntBASIC13.07□□□□□ -0.32
CHMP24386 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.07□□□□□ -0.32
CHMP24386 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.07□□□□□ -0.32
CHMP24386 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.07□□□□□ -0.32
CHMP24386 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CHMP24386 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.07□□□□□ -0.32
CHMP24386 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.07□□□□□ -0.32
CHMP24386 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.07□□□□□ -0.32
CHMP24386 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.07□□□□□ -0.32
CHMP24386 AP001505.2-201ENST00000616815 443 ntBASIC13.07□□□□□ -0.32
CHMP24386 CR392039.2-201ENST00000623182 509 ntBASIC13.07□□□□□ -0.32
CHMP24386 AC068587.10-201ENST00000641210 219 ntBASIC13.07□□□□□ -0.32
CHMP24386 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
CHMP24386 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CHMP24386 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 PHB-210ENST00000511832 1509 ntTSL 2 BASIC13.07□□□□□ -0.32
CHMP24386 Z98257.2-202ENST00000641138 1548 ntBASIC13.07□□□□□ -0.32
CHMP24386 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.07□□□□□ -0.32
CHMP24386 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.07□□□□□ -0.32
CHMP24386 LINC00567-201ENST00000569854 3409 ntBASIC13.07□□□□□ -0.32
CHMP24386 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.07□□□□□ -0.32
CHMP24386 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CHMP24386 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CHMP24386 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.06□□□□□ -0.32
CHMP24386 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.06□□□□□ -0.32
CHMP24386 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CHMP24386 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CHMP24386 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC13.06□□□□□ -0.32
CHMP24386 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 AL031719.1-201ENST00000623365 2587 ntBASIC13.06□□□□□ -0.32
CHMP24386 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.06□□□□□ -0.32
CHMP24386 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CHMP24386 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.06□□□□□ -0.32
CHMP24386 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC13.06□□□□□ -0.32
CHMP24386 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.06□□□□□ -0.32
CHMP24386 AL596276.2-201ENST00000447525 331 ntBASIC13.06□□□□□ -0.32
CHMP24386 AL353637.1-201ENST00000451571 732 ntBASIC13.06□□□□□ -0.32
CHMP24386 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.06□□□□□ -0.32
CHMP24386 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.06□□□□□ -0.32
CHMP24386 AC140658.4-201ENST00000561990 352 ntBASIC13.06□□□□□ -0.32
CHMP24386 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.06□□□□□ -0.32
CHMP24386 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.06□□□□□ -0.32
CHMP24386 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.06□□□□□ -0.32
CHMP24386 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CHMP24386 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CHMP24386 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms