Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MYL7-201ENST00000223364 612 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TOP2AP11388 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TOP2AP11388 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TOP2AP11388 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TOP2AP11388 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC23.28■■□□□ 1.32
TOP2AP11388 TUBB8P9-201ENST00000422534 1276 ntBASIC23.28■■□□□ 1.32
TOP2AP11388 TUBB8P10-201ENST00000430210 1279 ntBASIC23.28■■□□□ 1.32
TOP2AP11388 RNF7-205ENST00000480908 782 ntTSL 4 BASIC23.28■■□□□ 1.32
TOP2AP11388 PDPN-208ENST00000509009 571 ntTSL 4 BASIC23.28■■□□□ 1.32
TOP2AP11388 NUP210P2-201ENST00000510577 282 ntBASIC23.28■■□□□ 1.32
TOP2AP11388 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC23.28■■□□□ 1.32
TOP2AP11388 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC23.28■■□□□ 1.32
TOP2AP11388 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TOP2AP11388 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TOP2AP11388 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC23.28■■□□□ 1.32
TOP2AP11388 EGLN3-205ENST00000547327 2849 ntBASIC23.28■■□□□ 1.32
TOP2AP11388 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC23.28■■□□□ 1.32
TOP2AP11388 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC23.28■■□□□ 1.32
TOP2AP11388 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
TOP2AP11388 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC23.28■■□□□ 1.32
TOP2AP11388 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TOP2AP11388 LILRB4-205ENST00000430952 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
TOP2AP11388 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
TOP2AP11388 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TOP2AP11388 IMPDH1P5-201ENST00000439688 1540 ntBASIC23.28■■□□□ 1.32
TOP2AP11388 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC23.28■■□□□ 1.32
TOP2AP11388 RNASE8-201ENST00000308227 634 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
TOP2AP11388 MIR181D-201ENST00000384853 137 ntBASIC23.28■■□□□ 1.32
TOP2AP11388 AC004910.1-201ENST00000433493 787 ntBASIC23.28■■□□□ 1.32
TOP2AP11388 RPS15P5-201ENST00000449885 432 ntBASIC23.28■■□□□ 1.32
TOP2AP11388 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC23.28■■□□□ 1.32
TOP2AP11388 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC23.28■■□□□ 1.32
TOP2AP11388 NEMF-210ENST00000556672 590 ntTSL 2 BASIC23.28■■□□□ 1.32
TOP2AP11388 Z93930.2-203ENST00000585003 516 ntBASIC23.28■■□□□ 1.32
TOP2AP11388 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
TOP2AP11388 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
TOP2AP11388 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC23.27■■□□□ 1.32
TOP2AP11388 AC005549.1-201ENST00000579438 1629 ntBASIC23.27■■□□□ 1.32
TOP2AP11388 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TOP2AP11388 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TOP2AP11388 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TOP2AP11388 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TOP2AP11388 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TOP2AP11388 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
TOP2AP11388 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TOP2AP11388 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
TOP2AP11388 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC23.27■■□□□ 1.32
TOP2AP11388 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.32
TOP2AP11388 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC23.27■■□□□ 1.32
TOP2AP11388 DTX2P1-201ENST00000425797 1633 ntBASIC23.27■■□□□ 1.32
TOP2AP11388 TPI1P3-201ENST00000335020 740 ntBASIC23.27■■□□□ 1.32
TOP2AP11388 PRADC1P1-201ENST00000412317 525 ntBASIC23.27■■□□□ 1.32
TOP2AP11388 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC23.27■■□□□ 1.32
TOP2AP11388 IL2RG-204ENST00000456850 540 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TOP2AP11388 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC23.27■■□□□ 1.32
TOP2AP11388 IFI27L1-203ENST00000553664 647 ntTSL 5 BASIC23.27■■□□□ 1.32
TOP2AP11388 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC23.27■■□□□ 1.32
TOP2AP11388 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC23.27■■□□□ 1.32
TOP2AP11388 NEAT1-204ENST00000612303 572 ntTSL 3 BASIC23.27■■□□□ 1.32
TOP2AP11388 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TOP2AP11388 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC23.27■■□□□ 1.32
TOP2AP11388 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TOP2AP11388 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TOP2AP11388 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TOP2AP11388 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC23.26■■□□□ 1.31
TOP2AP11388 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TOP2AP11388 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TOP2AP11388 AC046158.3-201ENST00000624947 2558 ntBASIC23.26■■□□□ 1.31
TOP2AP11388 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
TOP2AP11388 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC23.26■■□□□ 1.31
TOP2AP11388 TTC26-207ENST00000478836 1794 ntTSL 2 BASIC23.26■■□□□ 1.31
TOP2AP11388 FAM76A-202ENST00000234549 992 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TOP2AP11388 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
TOP2AP11388 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
TOP2AP11388 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TOP2AP11388 RPSAP67-201ENST00000584105 862 ntBASIC23.26■■□□□ 1.31
TOP2AP11388 AL589743.3-201ENST00000604121 517 ntBASIC23.26■■□□□ 1.31
TOP2AP11388 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TOP2AP11388 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC23.26■■□□□ 1.31
TOP2AP11388 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TOP2AP11388 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC23.26■■□□□ 1.31
TOP2AP11388 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
TOP2AP11388 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
TOP2AP11388 FAM45BP-202ENST00000592932 1624 ntBASIC23.25■■□□□ 1.31
TOP2AP11388 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TOP2AP11388 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC23.25■■□□□ 1.31
TOP2AP11388 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TOP2AP11388 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
TOP2AP11388 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TOP2AP11388 NCLP1-201ENST00000445357 1963 ntBASIC23.25■■□□□ 1.31
TOP2AP11388 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC23.25■■□□□ 1.31
TOP2AP11388 BX088651.3-201ENST00000418155 352 ntBASIC23.25■■□□□ 1.31
TOP2AP11388 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC23.25■■□□□ 1.31
TOP2AP11388 RPL7AP53-201ENST00000468834 793 ntBASIC23.25■■□□□ 1.31
TOP2AP11388 AP001922.5-201ENST00000527803 651 ntTSL 4 BASIC23.25■■□□□ 1.31
TOP2AP11388 AL136298.3-201ENST00000556746 445 ntBASIC23.25■■□□□ 1.31
TOP2AP11388 DMRTC1-201ENST00000595412 1190 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
TOP2AP11388 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC23.25■■□□□ 1.31
TOP2AP11388 AC009061.2-202ENST00000602596 696 ntTSL 2 BASIC23.25■■□□□ 1.31
TOP2AP11388 AC009779.7-201ENST00000609031 469 ntBASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms