Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
APOC1P02654 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC12.4□□□□□ -0.42
APOC1P02654 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.4□□□□□ -0.42
APOC1P02654 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC12.4□□□□□ -0.42
APOC1P02654 AP002353.1-201ENST00000528257 1599 ntBASIC12.4□□□□□ -0.42
APOC1P02654 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
APOC1P02654 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.4□□□□□ -0.42
APOC1P02654 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.4□□□□□ -0.42
APOC1P02654 AC027020.2-201ENST00000602585 2389 ntBASIC12.4□□□□□ -0.42
APOC1P02654 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 ANKRD19P-201ENST00000338192 862 ntBASIC12.4□□□□□ -0.42
APOC1P02654 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
APOC1P02654 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC12.4□□□□□ -0.42
APOC1P02654 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC12.4□□□□□ -0.42
APOC1P02654 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 AC078875.1-201ENST00000431907 724 ntBASIC12.4□□□□□ -0.42
APOC1P02654 HLA-J-204ENST00000495278 958 ntBASIC12.4□□□□□ -0.42
APOC1P02654 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.4□□□□□ -0.42
APOC1P02654 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.4□□□□□ -0.42
APOC1P02654 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.4□□□□□ -0.42
APOC1P02654 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.4□□□□□ -0.42
APOC1P02654 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.4□□□□□ -0.42
APOC1P02654 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
APOC1P02654 BNIP3P13-201ENST00000599968 566 ntBASIC12.4□□□□□ -0.42
APOC1P02654 AL035252.4-201ENST00000624174 288 ntBASIC12.4□□□□□ -0.42
APOC1P02654 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
APOC1P02654 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
APOC1P02654 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
APOC1P02654 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
APOC1P02654 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.4□□□□□ -0.42
APOC1P02654 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.4□□□□□ -0.42
APOC1P02654 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
APOC1P02654 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
APOC1P02654 ABCD1P2-201ENST00000429313 1601 ntBASIC12.4□□□□□ -0.42
APOC1P02654 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
APOC1P02654 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.4□□□□□ -0.42
APOC1P02654 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.4□□□□□ -0.42
APOC1P02654 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
APOC1P02654 AC010336.1-201ENST00000539278 4739 ntBASIC12.4□□□□□ -0.42
APOC1P02654 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
APOC1P02654 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
APOC1P02654 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
APOC1P02654 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
APOC1P02654 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.39□□□□□ -0.43
APOC1P02654 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.39□□□□□ -0.43
APOC1P02654 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.39□□□□□ -0.43
APOC1P02654 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.39□□□□□ -0.43
APOC1P02654 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
APOC1P02654 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.39□□□□□ -0.43
APOC1P02654 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
APOC1P02654 MIR663B-201ENST00000408361 115 ntBASIC12.39□□□□□ -0.43
APOC1P02654 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 HNRNPA1P63-201ENST00000427917 963 ntBASIC12.39□□□□□ -0.43
APOC1P02654 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC12.39□□□□□ -0.43
APOC1P02654 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.39□□□□□ -0.43
APOC1P02654 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
APOC1P02654 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.39□□□□□ -0.43
APOC1P02654 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.39□□□□□ -0.43
APOC1P02654 AC022210.1-201ENST00000449856 793 ntBASIC12.39□□□□□ -0.43
APOC1P02654 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
APOC1P02654 RPSAP36-202ENST00000494591 1261 ntBASIC12.39□□□□□ -0.43
APOC1P02654 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
APOC1P02654 CHCHD2P2-201ENST00000503744 321 ntBASIC12.39□□□□□ -0.43
APOC1P02654 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.39□□□□□ -0.43
APOC1P02654 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC12.39□□□□□ -0.43
APOC1P02654 SNX29P1-201ENST00000548357 1007 ntBASIC12.39□□□□□ -0.43
APOC1P02654 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.39□□□□□ -0.43
APOC1P02654 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.39□□□□□ -0.43
APOC1P02654 RN7SL560P-201ENST00000577943 264 ntBASIC12.39□□□□□ -0.43
APOC1P02654 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.39□□□□□ -0.43
APOC1P02654 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.39□□□□□ -0.43
APOC1P02654 AC092299.1-201ENST00000632679 757 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms