Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 ALG1L13P-202ENST00000519320 584 ntBASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 AC016629.1-201ENST00000596579 586 ntBASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 EML1-203ENST00000334192 4064 ntTSL 5 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 TNN-202ENST00000621086 4234 ntTSL 5 BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPF3BQ9BZI7 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
UPF3BQ9BZI7 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
UPF3BQ9BZI7 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
UPF3BQ9BZI7 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 AL031719.1-201ENST00000623365 2587 ntBASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 TP73-207ENST00000378290 1831 ntTSL 2 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 AL662890.1-201ENST00000396818 632 ntBASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 FXNP2-201ENST00000411625 547 ntBASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 AC115284.2-201ENST00000624646 2054 ntBASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
UPF3BQ9BZI7 AC026271.4-201ENST00000578214 1833 ntBASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 NME1-209ENST00000511355 1645 ntTSL 5 BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 EGLN3-205ENST00000547327 2849 ntBASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 KRT8P43-201ENST00000406052 1458 ntBASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 RN7SKP214-201ENST00000364208 315 ntBASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 NCR3-202ENST00000376071 541 ntTSL 5 BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 ELP5-212ENST00000574255 671 ntTSL 2 BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPF3BQ9BZI7 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms