Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.06■□□□□ 0.32
RC3H1Q5TC82 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 AC016397.2-201ENST00000624848 1985 ntBASIC17.06■□□□□ 0.32
RC3H1Q5TC82 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 CFL1P6-201ENST00000400899 494 ntBASIC17.06■□□□□ 0.32
RC3H1Q5TC82 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 AKR1C6P-201ENST00000432950 983 ntBASIC17.06■□□□□ 0.32
RC3H1Q5TC82 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 RPE-208ENST00000436630 1128 ntTSL 2 BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 SRP9P1-201ENST00000445874 261 ntBASIC17.06■□□□□ 0.32
RC3H1Q5TC82 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 HAX1-211ENST00000532105 771 ntTSL 3 BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 Z82244.1-201ENST00000631502 840 ntBASIC17.06■□□□□ 0.32
RC3H1Q5TC82 DUX4L33-201ENST00000635217 958 ntBASIC17.06■□□□□ 0.32
RC3H1Q5TC82 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 AL157996.1-201ENST00000624684 2299 ntBASIC17.06■□□□□ 0.32
RC3H1Q5TC82 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RC3H1Q5TC82 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 TCP1-215ENST00000544255 1403 ntTSL 5 BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 SRL-202ENST00000537996 1814 ntTSL 2 BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 RPL4P6-201ENST00000438116 1304 ntBASIC17.05■□□□□ 0.32
RC3H1Q5TC82 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 AL031577.1-201ENST00000339867 399 ntBASIC17.05■□□□□ 0.32
RC3H1Q5TC82 NAA10-205ENST00000393712 908 ntTSL 5 BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 AL121994.1-201ENST00000413189 402 ntBASIC17.05■□□□□ 0.32
RC3H1Q5TC82 RN7SL22P-201ENST00000471800 269 ntBASIC17.05■□□□□ 0.32
RC3H1Q5TC82 RN7SL789P-201ENST00000478944 293 ntBASIC17.05■□□□□ 0.32
RC3H1Q5TC82 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 DDX11L8-201ENST00000535849 366 ntBASIC17.05■□□□□ 0.32
RC3H1Q5TC82 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 AC091691.1-201ENST00000583587 1018 ntBASIC17.05■□□□□ 0.32
RC3H1Q5TC82 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 KRT8P24-201ENST00000560290 1559 ntBASIC17.05■□□□□ 0.32
RC3H1Q5TC82 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RC3H1Q5TC82 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 STK25-235ENST00000543554 2556 ntTSL 2 BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 AC008021.1-201ENST00000474180 414 ntBASIC17.04■□□□□ 0.32
RC3H1Q5TC82 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC17.04■□□□□ 0.32
RC3H1Q5TC82 CCNL2P1-201ENST00000512846 969 ntBASIC17.04■□□□□ 0.32
RC3H1Q5TC82 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms