Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.82□□□□□ -0.36
RFC3P40938 RNA5SP406-201ENST00000516106 112 ntBASIC12.82□□□□□ -0.36
RFC3P40938 IGHV3-37-201ENST00000518544 340 ntBASIC12.82□□□□□ -0.36
RFC3P40938 AC068867.1-201ENST00000559855 150 ntBASIC12.82□□□□□ -0.36
RFC3P40938 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.82□□□□□ -0.36
RFC3P40938 RN7SL455P-201ENST00000580629 282 ntBASIC12.82□□□□□ -0.36
RFC3P40938 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC12.82□□□□□ -0.36
RFC3P40938 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC12.82□□□□□ -0.36
RFC3P40938 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RFC3P40938 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.82□□□□□ -0.36
RFC3P40938 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.82□□□□□ -0.36
RFC3P40938 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RFC3P40938 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RFC3P40938 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFC3P40938 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RFC3P40938 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFC3P40938 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RFC3P40938 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RFC3P40938 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFC3P40938 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
RFC3P40938 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
RFC3P40938 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFC3P40938 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.82□□□□□ -0.36
RFC3P40938 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RFC3P40938 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFC3P40938 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.82□□□□□ -0.36
RFC3P40938 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFC3P40938 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RFC3P40938 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
RFC3P40938 AC131902.2-201ENST00000566892 2172 ntBASIC12.81□□□□□ -0.36
RFC3P40938 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.81□□□□□ -0.36
RFC3P40938 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 AL365181.3-201ENST00000605886 3222 ntBASIC12.81□□□□□ -0.36
RFC3P40938 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RFC3P40938 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.81□□□□□ -0.36
RFC3P40938 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
RFC3P40938 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
RFC3P40938 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.81□□□□□ -0.36
RFC3P40938 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.81□□□□□ -0.36
RFC3P40938 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
RFC3P40938 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RFC3P40938 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC12.81□□□□□ -0.36
RFC3P40938 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RFC3P40938 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.81□□□□□ -0.36
RFC3P40938 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.81□□□□□ -0.36
RFC3P40938 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.81□□□□□ -0.36
RFC3P40938 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC12.81□□□□□ -0.36
RFC3P40938 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.81□□□□□ -0.36
RFC3P40938 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC12.81□□□□□ -0.36
RFC3P40938 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.81□□□□□ -0.36
RFC3P40938 CTBP2P4-201ENST00000513884 920 ntBASIC12.81□□□□□ -0.36
RFC3P40938 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
RFC3P40938 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC12.81□□□□□ -0.36
RFC3P40938 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.81□□□□□ -0.36
RFC3P40938 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
RFC3P40938 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC12.81□□□□□ -0.36
RFC3P40938 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC12.81□□□□□ -0.36
RFC3P40938 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC12.81□□□□□ -0.36
RFC3P40938 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
RFC3P40938 AC105137.3-201ENST00000617588 984 ntBASIC12.81□□□□□ -0.36
RFC3P40938 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
RFC3P40938 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.81□□□□□ -0.36
RFC3P40938 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.81□□□□□ -0.36
RFC3P40938 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.81□□□□□ -0.36
RFC3P40938 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.81□□□□□ -0.36
RFC3P40938 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.81□□□□□ -0.36
RFC3P40938 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.81□□□□□ -0.36
RFC3P40938 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
RFC3P40938 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
RFC3P40938 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFC3P40938 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
RFC3P40938 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.8□□□□□ -0.36
RFC3P40938 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms