Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 AC087499.6-201ENST00000411576 835 ntBASIC12.1□□□□□ -0.47
BEST4Q8NFU0 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 AC093214.1-201ENST00000511688 1107 ntBASIC12.1□□□□□ -0.47
BEST4Q8NFU0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 PDZRN3-205ENST00000466780 2737 ntTSL 2 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 AC008764.8-201ENST00000623966 2717 ntBASIC12.1□□□□□ -0.47
BEST4Q8NFU0 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 TMPRSS4-213ENST00000522824 2052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 KRT18P28-201ENST00000453838 1332 ntBASIC12.1□□□□□ -0.47
BEST4Q8NFU0 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
BEST4Q8NFU0 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 TPM3P8-201ENST00000330554 643 ntBASIC12.09□□□□□ -0.47
BEST4Q8NFU0 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.09□□□□□ -0.47
BEST4Q8NFU0 INE1-201ENST00000456273 945 ntBASIC12.09□□□□□ -0.47
BEST4Q8NFU0 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
BEST4Q8NFU0 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms