Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 KRT18P64-201ENST00000434946 1219 ntBASIC7.58□□□□□ -1.2
LCA10Q71F78 SPDYE14P-201ENST00000442619 822 ntBASIC7.58□□□□□ -1.2
LCA10Q71F78 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LCA10Q71F78 SERBP1P3-201ENST00000459980 809 ntBASIC7.58□□□□□ -1.2
LCA10Q71F78 POLD2P1-201ENST00000511220 997 ntBASIC7.58□□□□□ -1.2
LCA10Q71F78 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC7.58□□□□□ -1.2
LCA10Q71F78 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC7.58□□□□□ -1.2
LCA10Q71F78 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LCA10Q71F78 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC7.58□□□□□ -1.2
LCA10Q71F78 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC7.58□□□□□ -1.2
LCA10Q71F78 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC7.58□□□□□ -1.2
LCA10Q71F78 AL079307.3-201ENST00000556114 283 ntBASIC7.58□□□□□ -1.2
LCA10Q71F78 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC7.58□□□□□ -1.2
LCA10Q71F78 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC7.58□□□□□ -1.2
LCA10Q71F78 AC005829.1-201ENST00000570002 483 ntBASIC7.58□□□□□ -1.2
LCA10Q71F78 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC7.58□□□□□ -1.2
LCA10Q71F78 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LCA10Q71F78 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC7.58□□□□□ -1.2
LCA10Q71F78 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC7.58□□□□□ -1.2
LCA10Q71F78 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC7.58□□□□□ -1.2
LCA10Q71F78 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC7.58□□□□□ -1.2
LCA10Q71F78 AL589739.1-201ENST00000607720 493 ntBASIC7.58□□□□□ -1.2
LCA10Q71F78 MIR6080-201ENST00000617359 66 ntBASIC7.58□□□□□ -1.2
LCA10Q71F78 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
LCA10Q71F78 AL645728.2-202ENST00000641679 227 ntBASIC7.58□□□□□ -1.2
LCA10Q71F78 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LCA10Q71F78 DUSP27-202ENST00000361200 4164 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
LCA10Q71F78 TRIM46-201ENST00000334634 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LCA10Q71F78 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC7.58□□□□□ -1.2
LCA10Q71F78 Z97205.2-201ENST00000564697 1639 ntBASIC7.58□□□□□ -1.2
LCA10Q71F78 NEFM-204ENST00000518131 2500 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
LCA10Q71F78 AC073476.3-201ENST00000563949 2507 ntBASIC7.58□□□□□ -1.2
LCA10Q71F78 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC7.58□□□□□ -1.2
LCA10Q71F78 NLRC3-201ENST00000324659 3414 ntTSL 5 BASIC7.58□□□□□ -1.2
LCA10Q71F78 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
LCA10Q71F78 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
LCA10Q71F78 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
LCA10Q71F78 POLN-201ENST00000382865 2899 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LCA10Q71F78 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
LCA10Q71F78 TP53-208ENST00000504290 2331 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LCA10Q71F78 TP53-220ENST00000610623 2331 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LCA10Q71F78 DNASE1-202ENST00000407479 8552 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LCA10Q71F78 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LCA10Q71F78 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC7.58□□□□□ -1.2
LCA10Q71F78 ZNF630-206ENST00000442455 2829 ntAPPRIS P2 TSL 4 BASIC7.58□□□□□ -1.2
LCA10Q71F78 ZBTB1-203ENST00000554015 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LCA10Q71F78 NRP1-208ENST00000395995 5826 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LCA10Q71F78 TFCP2L1-201ENST00000263707 9292 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LCA10Q71F78 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC7.58□□□□□ -1.2
LCA10Q71F78 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LCA10Q71F78 C3AR1-201ENST00000307637 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
LCA10Q71F78 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC7.58□□□□□ -1.2
LCA10Q71F78 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC7.58□□□□□ -1.2
LCA10Q71F78 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LCA10Q71F78 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
LCA10Q71F78 THSD7A-202ENST00000423059 10663 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
LCA10Q71F78 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC7.57□□□□□ -1.2
LCA10Q71F78 ANKEF1-202ENST00000378392 2894 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LCA10Q71F78 TMEM164-202ENST00000372068 5566 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
LCA10Q71F78 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC7.57□□□□□ -1.2
LCA10Q71F78 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LCA10Q71F78 VWCE-208ENST00000613271 3032 ntTSL 5 BASIC7.57□□□□□ -1.2
LCA10Q71F78 CETN4P-206ENST00000642099 2168 ntBASIC7.57□□□□□ -1.2
LCA10Q71F78 FAM131A-201ENST00000310585 3677 ntTSL 2 BASIC7.57□□□□□ -1.2
LCA10Q71F78 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
LCA10Q71F78 OSBP2-204ENST00000407373 3669 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
LCA10Q71F78 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LCA10Q71F78 AC012617.1-204ENST00000586340 2305 ntBASIC7.57□□□□□ -1.2
LCA10Q71F78 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LCA10Q71F78 CDHR4-202ENST00000412678 2476 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LCA10Q71F78 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC7.57□□□□□ -1.2
LCA10Q71F78 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
LCA10Q71F78 DDI1-201ENST00000302259 2609 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
LCA10Q71F78 UNC93A-201ENST00000230256 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LCA10Q71F78 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LCA10Q71F78 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
LCA10Q71F78 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LCA10Q71F78 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC7.57□□□□□ -1.2
LCA10Q71F78 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC7.57□□□□□ -1.2
LCA10Q71F78 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LCA10Q71F78 USB1-207ENST00000563149 1751 ntTSL 2 BASIC7.57□□□□□ -1.2
LCA10Q71F78 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC7.57□□□□□ -1.2
LCA10Q71F78 OTOG-201ENST00000342528 4992 ntTSL 2 BASIC7.57□□□□□ -1.2
LCA10Q71F78 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC7.57□□□□□ -1.2
LCA10Q71F78 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
LCA10Q71F78 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LCA10Q71F78 STOM-202ENST00000347359 870 ntTSL 2 BASIC7.57□□□□□ -1.2
LCA10Q71F78 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
LCA10Q71F78 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
LCA10Q71F78 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
LCA10Q71F78 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC7.57□□□□□ -1.2
LCA10Q71F78 AC004461.1-201ENST00000412461 403 ntBASIC7.57□□□□□ -1.2
LCA10Q71F78 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC7.57□□□□□ -1.2
LCA10Q71F78 AC015922.1-201ENST00000421102 1152 ntBASIC7.57□□□□□ -1.2
LCA10Q71F78 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC7.57□□□□□ -1.2
LCA10Q71F78 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC7.57□□□□□ -1.2
LCA10Q71F78 KRT18P43-201ENST00000469825 1281 ntBASIC7.57□□□□□ -1.2
LCA10Q71F78 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC7.57□□□□□ -1.2
LCA10Q71F78 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC7.57□□□□□ -1.2
LCA10Q71F78 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC7.57□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms