Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 TEKT4P2-202ENST00000559466 1312 ntBASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 SARS-202ENST00000369923 1882 ntTSL 5 BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
RFWD3Q6PCD5 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 RN7SL81P-201ENST00000493781 261 ntBASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 ORAOV1P1-201ENST00000503108 395 ntBASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 SLC25A15P3-201ENST00000505530 290 ntBASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 RN7SL190P-201ENST00000582519 257 ntBASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 AC092171.5-201ENST00000608012 942 ntBASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 BAP1-211ENST00000615113 489 ntBASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
RFWD3Q6PCD5 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 RN7SL181P-201ENST00000462921 277 ntBASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 AC138701.2-201ENST00000553634 226 ntBASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 SIGLEC22P-201ENST00000599104 714 ntBASIC14.55□□□□□ -0.08
RFWD3Q6PCD5 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms