Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN6P56747 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.33□□□□□ -0.28
CLDN6P56747 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN6P56747 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.33□□□□□ -0.28
CLDN6P56747 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN6P56747 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN6P56747 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CLDN6P56747 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.33□□□□□ -0.28
CLDN6P56747 EEF1DP2-201ENST00000433698 843 ntBASIC13.33□□□□□ -0.28
CLDN6P56747 NALT1-202ENST00000450304 437 ntTSL 3 BASIC13.33□□□□□ -0.28
CLDN6P56747 GULOP-201ENST00000454030 748 ntBASIC13.33□□□□□ -0.28
CLDN6P56747 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC13.33□□□□□ -0.28
CLDN6P56747 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN6P56747 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN6P56747 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC13.33□□□□□ -0.28
CLDN6P56747 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CLDN6P56747 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC13.33□□□□□ -0.28
CLDN6P56747 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC13.33□□□□□ -0.28
CLDN6P56747 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN6P56747 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN6P56747 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
CLDN6P56747 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN6P56747 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CLDN6P56747 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
CLDN6P56747 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN6P56747 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC13.33□□□□□ -0.28
CLDN6P56747 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CLDN6P56747 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN6P56747 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
CLDN6P56747 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN6P56747 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CLDN6P56747 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.33□□□□□ -0.28
CLDN6P56747 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CLDN6P56747 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN6P56747 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN6P56747 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.32□□□□□ -0.28
CLDN6P56747 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
CLDN6P56747 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CLDN6P56747 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 AC104581.4-201ENST00000623126 3052 ntBASIC13.32□□□□□ -0.28
CLDN6P56747 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CLDN6P56747 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN6P56747 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CLDN6P56747 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 SNORA57-201ENST00000383870 149 ntBASIC13.32□□□□□ -0.28
CLDN6P56747 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN6P56747 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC13.32□□□□□ -0.28
CLDN6P56747 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC13.32□□□□□ -0.28
CLDN6P56747 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.32□□□□□ -0.28
CLDN6P56747 RHOQP2-201ENST00000449922 579 ntBASIC13.32□□□□□ -0.28
CLDN6P56747 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CLDN6P56747 AC023906.1-201ENST00000486386 453 ntBASIC13.32□□□□□ -0.28
CLDN6P56747 ALG1L7P-201ENST00000502317 768 ntBASIC13.32□□□□□ -0.28
CLDN6P56747 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC13.32□□□□□ -0.28
CLDN6P56747 ACY3-202ENST00000529256 933 ntTSL 3 BASIC13.32□□□□□ -0.28
CLDN6P56747 RPL18-205ENST00000549273 1036 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN6P56747 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC13.32□□□□□ -0.28
CLDN6P56747 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN6P56747 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC13.32□□□□□ -0.28
CLDN6P56747 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CLDN6P56747 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
CLDN6P56747 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.32□□□□□ -0.28
CLDN6P56747 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CLDN6P56747 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.32□□□□□ -0.28
CLDN6P56747 AC012617.1-204ENST00000586340 2305 ntBASIC13.31□□□□□ -0.28
CLDN6P56747 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.31□□□□□ -0.28
CLDN6P56747 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN6P56747 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN6P56747 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN6P56747 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN6P56747 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CLDN6P56747 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN6P56747 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
CLDN6P56747 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN6P56747 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN6P56747 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN6P56747 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN6P56747 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN6P56747 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN6P56747 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CLDN6P56747 Z98885.3-201ENST00000624882 1757 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms