Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC104117.1-201ENST00000517817 900 ntBASIC14.92□□□□□ -0.02
BRCA2P51587 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC14.92□□□□□ -0.02
BRCA2P51587 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
BRCA2P51587 AC099795.2-201ENST00000639582 440 ntBASIC14.92□□□□□ -0.02
BRCA2P51587 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BRCA2P51587 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
BRCA2P51587 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
BRCA2P51587 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC14.92□□□□□ -0.02
BRCA2P51587 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
BRCA2P51587 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRCA2P51587 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BRCA2P51587 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BRCA2P51587 OR52L1-201ENST00000332249 1094 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
BRCA2P51587 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.92□□□□□ -0.02
BRCA2P51587 MIR4539-201ENST00000579784 60 ntBASIC14.92□□□□□ -0.02
BRCA2P51587 AL117379.1-201ENST00000619319 677 ntBASIC14.92□□□□□ -0.02
BRCA2P51587 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRCA2P51587 CACNA1G-AS1-202ENST00000505793 1433 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BRCA2P51587 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BRCA2P51587 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRCA2P51587 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC14.92□□□□□ -0.02
BRCA2P51587 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC14.92□□□□□ -0.02
BRCA2P51587 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC14.92□□□□□ -0.02
BRCA2P51587 FAM138A-201ENST00000417324 1187 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BRCA2P51587 GGT8P-201ENST00000418938 532 ntBASIC14.92□□□□□ -0.02
BRCA2P51587 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC14.92□□□□□ -0.02
BRCA2P51587 MTHFD2P7-201ENST00000483867 983 ntBASIC14.92□□□□□ -0.02
BRCA2P51587 FAM138D-201ENST00000504074 1187 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BRCA2P51587 FAM138E-201ENST00000507796 1187 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BRCA2P51587 AC097658.2-201ENST00000512715 624 ntTSL 3 BASIC14.92□□□□□ -0.02
BRCA2P51587 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
BRCA2P51587 AC018868.2-201ENST00000559655 1259 ntBASIC14.92□□□□□ -0.02
BRCA2P51587 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
BRCA2P51587 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRCA2P51587 AC004554.2-201ENST00000634846 1893 ntTSL 5 BASIC14.91□□□□□ -0.02
BRCA2P51587 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.91□□□□□ -0.02
BRCA2P51587 TSACC-203ENST00000368253 512 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRCA2P51587 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC14.91□□□□□ -0.02
BRCA2P51587 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BRCA2P51587 AC067942.2-201ENST00000506227 1268 ntBASIC14.91□□□□□ -0.02
BRCA2P51587 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC14.91□□□□□ -0.02
BRCA2P51587 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
BRCA2P51587 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
BRCA2P51587 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC14.91□□□□□ -0.02
BRCA2P51587 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.91□□□□□ -0.02
BRCA2P51587 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BRCA2P51587 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRCA2P51587 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRCA2P51587 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.91□□□□□ -0.02
BRCA2P51587 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
BRCA2P51587 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.91□□□□□ -0.02
BRCA2P51587 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRCA2P51587 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC14.91□□□□□ -0.02
BRCA2P51587 snoZ6.3-201ENST00000583496 76 ntBASIC14.91□□□□□ -0.02
BRCA2P51587 MDC1-209ENST00000613547 830 ntTSL 5 BASIC14.91□□□□□ -0.02
BRCA2P51587 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
BRCA2P51587 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.91□□□□□ -0.02
BRCA2P51587 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BRCA2P51587 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
BRCA2P51587 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.91□□□□□ -0.02
BRCA2P51587 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
BRCA2P51587 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.91□□□□□ -0.02
BRCA2P51587 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
BRCA2P51587 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC14.91□□□□□ -0.02
BRCA2P51587 EEF1GP1-201ENST00000457231 1299 ntBASIC14.91□□□□□ -0.02
BRCA2P51587 AL136360.2-201ENST00000502636 581 ntTSL 4 BASIC14.91□□□□□ -0.02
BRCA2P51587 RN7SL624P-201ENST00000580297 278 ntBASIC14.91□□□□□ -0.02
BRCA2P51587 SNORD55-201ENST00000581525 80 ntBASIC14.91□□□□□ -0.02
BRCA2P51587 AL139424.3-202ENST00000641619 917 ntBASIC14.91□□□□□ -0.02
BRCA2P51587 RBM4-202ENST00000396053 1337 ntTSL 2 BASIC14.91□□□□□ -0.02
BRCA2P51587 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC14.91□□□□□ -0.02
BRCA2P51587 GBAP1-208ENST00000566701 1546 ntBASIC14.91□□□□□ -0.02
BRCA2P51587 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
BRCA2P51587 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.9□□□□□ -0.02
BRCA2P51587 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCA2P51587 AC023824.1-201ENST00000562945 2975 ntBASIC14.9□□□□□ -0.02
BRCA2P51587 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCA2P51587 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCA2P51587 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
BRCA2P51587 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
BRCA2P51587 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCA2P51587 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCA2P51587 FKBP4P1-201ENST00000507284 1347 ntBASIC14.9□□□□□ -0.02
BRCA2P51587 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC14.9□□□□□ -0.02
BRCA2P51587 RN7SL483P-201ENST00000478417 285 ntBASIC14.9□□□□□ -0.02
BRCA2P51587 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC14.9□□□□□ -0.02
BRCA2P51587 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC14.9□□□□□ -0.02
BRCA2P51587 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC14.9□□□□□ -0.02
BRCA2P51587 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
BRCA2P51587 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCA2P51587 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCA2P51587 CREB5-204ENST00000396300 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCA2P51587 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
BRCA2P51587 PAX6-255ENST00000639386 1723 ntTSL 5 BASIC14.9□□□□□ -0.02
BRCA2P51587 SNU13-201ENST00000215956 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCA2P51587 AC073488.1-201ENST00000416620 1600 ntBASIC14.9□□□□□ -0.02
BRCA2P51587 NBEAP3-201ENST00000420638 1493 ntBASIC14.9□□□□□ -0.02
BRCA2P51587 SNX18-202ENST00000343017 3140 ntBASIC14.9□□□□□ -0.02
BRCA2P51587 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
BRCA2P51587 CD300LB-201ENST00000314401 993 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms