Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL9A1P20849 AC008040.1-204ENST00000469301 1738 ntTSL 2 BASIC14.25□□□□□ -0.13
COL9A1P20849 OR4B1-201ENST00000309562 930 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
COL9A1P20849 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL9A1P20849 OR7E12P-201ENST00000344740 973 ntBASIC14.25□□□□□ -0.13
COL9A1P20849 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
COL9A1P20849 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.25□□□□□ -0.13
COL9A1P20849 RFESDP1-201ENST00000422350 461 ntBASIC14.25□□□□□ -0.13
COL9A1P20849 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.25□□□□□ -0.13
COL9A1P20849 AC092865.2-201ENST00000439409 971 ntBASIC14.25□□□□□ -0.13
COL9A1P20849 RN7SL677P-201ENST00000466970 319 ntBASIC14.25□□□□□ -0.13
COL9A1P20849 RN7SL351P-201ENST00000469306 248 ntBASIC14.25□□□□□ -0.13
COL9A1P20849 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC14.25□□□□□ -0.13
COL9A1P20849 AL512310.5-201ENST00000551999 515 ntBASIC14.25□□□□□ -0.13
COL9A1P20849 ABCC6P1-202ENST00000565118 796 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL9A1P20849 AC017100.1-201ENST00000565978 1169 ntBASIC14.25□□□□□ -0.13
COL9A1P20849 PCTP-206ENST00000573500 919 ntTSL 3 BASIC14.25□□□□□ -0.13
COL9A1P20849 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.25□□□□□ -0.13
COL9A1P20849 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
COL9A1P20849 KRT8P34-201ENST00000577607 1044 ntBASIC14.25□□□□□ -0.13
COL9A1P20849 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC14.25□□□□□ -0.13
COL9A1P20849 ZNF30-AS1-201ENST00000604333 625 ntTSL 3 BASIC14.25□□□□□ -0.13
COL9A1P20849 AL136982.5-201ENST00000605222 294 ntBASIC14.25□□□□□ -0.13
COL9A1P20849 IGHD-202ENST00000613640 1155 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
COL9A1P20849 AC091769.1-201ENST00000619576 568 ntBASIC14.25□□□□□ -0.13
COL9A1P20849 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL9A1P20849 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL9A1P20849 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL9A1P20849 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL9A1P20849 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL9A1P20849 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.25□□□□□ -0.13
COL9A1P20849 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.25□□□□□ -0.13
COL9A1P20849 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
COL9A1P20849 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.25□□□□□ -0.13
COL9A1P20849 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
COL9A1P20849 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
COL9A1P20849 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
COL9A1P20849 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL9A1P20849 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL9A1P20849 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.24□□□□□ -0.13
COL9A1P20849 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL9A1P20849 ODCP-201ENST00000459650 1639 ntBASIC14.24□□□□□ -0.13
COL9A1P20849 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.24□□□□□ -0.13
COL9A1P20849 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL9A1P20849 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC14.24□□□□□ -0.13
COL9A1P20849 MIR632-201ENST00000385193 94 ntBASIC14.24□□□□□ -0.13
COL9A1P20849 LINC00265-2P-201ENST00000413372 782 ntBASIC14.24□□□□□ -0.13
COL9A1P20849 GAPDHP65-201ENST00000425487 1006 ntBASIC14.24□□□□□ -0.13
COL9A1P20849 IQCF4-203ENST00000428561 420 ntBASIC14.24□□□□□ -0.13
COL9A1P20849 AL133325.2-201ENST00000431034 449 ntTSL 2 BASIC14.24□□□□□ -0.13
COL9A1P20849 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL9A1P20849 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL9A1P20849 EEF1GP1-201ENST00000457231 1299 ntBASIC14.24□□□□□ -0.13
COL9A1P20849 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC14.24□□□□□ -0.13
COL9A1P20849 RPL29P2-201ENST00000488409 460 ntBASIC14.24□□□□□ -0.13
COL9A1P20849 RNA5SP288-201ENST00000516075 93 ntBASIC14.24□□□□□ -0.13
COL9A1P20849 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC14.24□□□□□ -0.13
COL9A1P20849 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
COL9A1P20849 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC14.24□□□□□ -0.13
COL9A1P20849 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC14.24□□□□□ -0.13
COL9A1P20849 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC14.24□□□□□ -0.13
COL9A1P20849 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
COL9A1P20849 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC14.24□□□□□ -0.13
COL9A1P20849 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC14.24□□□□□ -0.13
COL9A1P20849 AC068134.4-201ENST00000613365 122 ntBASIC14.24□□□□□ -0.13
COL9A1P20849 MIR6871-201ENST00000613433 56 ntBASIC14.24□□□□□ -0.13
COL9A1P20849 AL353770.4-202ENST00000621296 1126 ntTSL 3 BASIC14.24□□□□□ -0.13
COL9A1P20849 BX005040.1-201ENST00000622281 1126 ntTSL 5 BASIC14.24□□□□□ -0.13
COL9A1P20849 RFC1-217ENST00000639695 867 ntTSL 5 BASIC14.24□□□□□ -0.13
COL9A1P20849 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL9A1P20849 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.24□□□□□ -0.13
COL9A1P20849 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
COL9A1P20849 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL9A1P20849 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL9A1P20849 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.24□□□□□ -0.13
COL9A1P20849 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL9A1P20849 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.24□□□□□ -0.13
COL9A1P20849 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL9A1P20849 KRT8P43-201ENST00000406052 1458 ntBASIC14.24□□□□□ -0.13
COL9A1P20849 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
COL9A1P20849 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC14.23□□□□□ -0.13
COL9A1P20849 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 AL445523.1-201ENST00000451184 1362 ntBASIC14.23□□□□□ -0.13
COL9A1P20849 GUCY2EP-203ENST00000531117 1918 ntBASIC14.23□□□□□ -0.13
COL9A1P20849 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.23□□□□□ -0.13
COL9A1P20849 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
COL9A1P20849 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
COL9A1P20849 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms