Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.88■□□□□ 0.29
MYCNP04198 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
MYCNP04198 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
MYCNP04198 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.88■□□□□ 0.29
MYCNP04198 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
MYCNP04198 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
MYCNP04198 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.88■□□□□ 0.29
MYCNP04198 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC16.88■□□□□ 0.29
MYCNP04198 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
MYCNP04198 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.88■□□□□ 0.29
MYCNP04198 AL356320.2-201ENST00000417263 507 ntBASIC16.88■□□□□ 0.29
MYCNP04198 AC006357.1-201ENST00000427073 531 ntTSL 4 BASIC16.88■□□□□ 0.29
MYCNP04198 AC006335.1-201ENST00000445200 547 ntBASIC16.88■□□□□ 0.29
MYCNP04198 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC16.88■□□□□ 0.29
MYCNP04198 AGPAT5P1-201ENST00000455855 1019 ntBASIC16.88■□□□□ 0.29
MYCNP04198 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC16.88■□□□□ 0.29
MYCNP04198 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.88■□□□□ 0.29
MYCNP04198 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.88■□□□□ 0.29
MYCNP04198 AC116345.2-201ENST00000512837 523 ntBASIC16.88■□□□□ 0.29
MYCNP04198 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.88■□□□□ 0.29
MYCNP04198 AC079866.1-201ENST00000534985 1220 ntBASIC16.88■□□□□ 0.29
MYCNP04198 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 AC008805.1-201ENST00000590892 364 ntBASIC16.88■□□□□ 0.29
MYCNP04198 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC16.88■□□□□ 0.29
MYCNP04198 AC007785.3-202ENST00000601033 518 ntTSL 3 BASIC16.88■□□□□ 0.29
MYCNP04198 IZUMO3-203ENST00000604921 743 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
MYCNP04198 AL358472.3-201ENST00000608147 415 ntBASIC16.88■□□□□ 0.29
MYCNP04198 AL353770.1-201ENST00000614915 403 ntBASIC16.88■□□□□ 0.29
MYCNP04198 AC117503.3-201ENST00000623811 601 ntBASIC16.88■□□□□ 0.29
MYCNP04198 AL162426.1-201ENST00000624141 743 ntBASIC16.88■□□□□ 0.29
MYCNP04198 AC068587.8-201ENST00000641239 219 ntBASIC16.88■□□□□ 0.29
MYCNP04198 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
MYCNP04198 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.88■□□□□ 0.29
MYCNP04198 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
MYCNP04198 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.88■□□□□ 0.29
MYCNP04198 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.88■□□□□ 0.29
MYCNP04198 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC16.88■□□□□ 0.29
MYCNP04198 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC16.88■□□□□ 0.29
MYCNP04198 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.88■□□□□ 0.29
MYCNP04198 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
MYCNP04198 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
MYCNP04198 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 AC026691.1-201ENST00000602502 2017 ntBASIC16.87■□□□□ 0.29
MYCNP04198 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
MYCNP04198 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
MYCNP04198 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
MYCNP04198 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
MYCNP04198 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.87■□□□□ 0.29
MYCNP04198 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
MYCNP04198 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.87■□□□□ 0.29
MYCNP04198 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
MYCNP04198 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
MYCNP04198 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
MYCNP04198 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC16.87■□□□□ 0.29
MYCNP04198 TRIM60P9Y-201ENST00000438459 816 ntBASIC16.87■□□□□ 0.29
MYCNP04198 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.87■□□□□ 0.29
MYCNP04198 TRIM60P11Y-201ENST00000445313 801 ntBASIC16.87■□□□□ 0.29
MYCNP04198 SEC11A-202ENST00000455959 1223 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
MYCNP04198 RN7SL818P-201ENST00000485099 259 ntBASIC16.87■□□□□ 0.29
MYCNP04198 MARK2P5-201ENST00000507649 634 ntBASIC16.87■□□□□ 0.29
MYCNP04198 AC093755.1-201ENST00000512950 1023 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 299.2 ms