Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 OR7E115P-201ENST00000382617 1024 ntBASIC12.48□□□□□ -0.41
ZIC3O60481 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC12.48□□□□□ -0.41
ZIC3O60481 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.48□□□□□ -0.41
ZIC3O60481 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC12.48□□□□□ -0.41
ZIC3O60481 RPL35P9-201ENST00000446059 350 ntBASIC12.48□□□□□ -0.41
ZIC3O60481 AC004837.1-201ENST00000446267 564 ntBASIC12.48□□□□□ -0.41
ZIC3O60481 KRT18P62-201ENST00000446618 1287 ntBASIC12.48□□□□□ -0.41
ZIC3O60481 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.48□□□□□ -0.41
ZIC3O60481 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC12.48□□□□□ -0.41
ZIC3O60481 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.48□□□□□ -0.41
ZIC3O60481 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.48□□□□□ -0.41
ZIC3O60481 AC226150.1-201ENST00000544259 466 ntBASIC12.48□□□□□ -0.41
ZIC3O60481 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
ZIC3O60481 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC12.48□□□□□ -0.41
ZIC3O60481 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.48□□□□□ -0.41
ZIC3O60481 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
ZIC3O60481 WT1-AS_6.1-201ENST00000614919 121 ntBASIC12.48□□□□□ -0.41
ZIC3O60481 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.48□□□□□ -0.41
ZIC3O60481 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.48□□□□□ -0.41
ZIC3O60481 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
ZIC3O60481 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
ZIC3O60481 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.48□□□□□ -0.41
ZIC3O60481 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
ZIC3O60481 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
ZIC3O60481 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ZIC3O60481 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.47□□□□□ -0.41
ZIC3O60481 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ZIC3O60481 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC12.47□□□□□ -0.41
ZIC3O60481 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.47□□□□□ -0.41
ZIC3O60481 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
ZIC3O60481 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC12.47□□□□□ -0.41
ZIC3O60481 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC12.47□□□□□ -0.41
ZIC3O60481 AC092978.1-202ENST00000637590 1327 ntBASIC12.47□□□□□ -0.41
ZIC3O60481 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.47□□□□□ -0.41
ZIC3O60481 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
ZIC3O60481 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC12.47□□□□□ -0.41
ZIC3O60481 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.47□□□□□ -0.41
ZIC3O60481 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.47□□□□□ -0.41
ZIC3O60481 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.47□□□□□ -0.41
ZIC3O60481 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC12.47□□□□□ -0.41
ZIC3O60481 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC12.47□□□□□ -0.41
ZIC3O60481 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC12.47□□□□□ -0.41
ZIC3O60481 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
ZIC3O60481 VENTXP3-201ENST00000546480 773 ntBASIC12.47□□□□□ -0.41
ZIC3O60481 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.47□□□□□ -0.41
ZIC3O60481 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC12.47□□□□□ -0.41
ZIC3O60481 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC12.47□□□□□ -0.41
ZIC3O60481 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC12.47□□□□□ -0.41
ZIC3O60481 AC105137.3-201ENST00000617588 984 ntBASIC12.47□□□□□ -0.41
ZIC3O60481 AC002044.2-201ENST00000624910 970 ntBASIC12.47□□□□□ -0.41
ZIC3O60481 RETN-203ENST00000629642 400 ntTSL 5 BASIC12.47□□□□□ -0.41
ZIC3O60481 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.47□□□□□ -0.41
ZIC3O60481 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
ZIC3O60481 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
ZIC3O60481 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 AC005014.1-201ENST00000432006 2976 ntBASIC12.47□□□□□ -0.41
ZIC3O60481 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.47□□□□□ -0.41
ZIC3O60481 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC12.47□□□□□ -0.41
ZIC3O60481 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
ZIC3O60481 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
ZIC3O60481 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC12.47□□□□□ -0.41
ZIC3O60481 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
ZIC3O60481 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
ZIC3O60481 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms