Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 RPL18P13-201ENST00000478088 569 ntBASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 IGHV3-71-201ENST00000523324 359 ntBASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 AC017083.2-201ENST00000608069 979 ntBASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 AL161773.1-201ENST00000624845 863 ntBASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 AC092299.1-201ENST00000632679 757 ntBASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 PCDHB19P-202ENST00000625133 2914 ntBASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 AC093462.1-201ENST00000621167 1683 ntBASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 AC018629.1-201ENST00000623381 1736 ntBASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLDN22Q8N7P3 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 FAM21FP-201ENST00000426241 1131 ntBASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 VDAC1P1-201ENST00000439229 848 ntBASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 Z93015.1-201ENST00000451718 390 ntBASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 RPL13AP20-201ENST00000459725 609 ntBASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 AC021723.1-201ENST00000486306 515 ntBASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 AC239800.4-201ENST00000603712 296 ntBASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 AC015967.2-201ENST00000624092 234 ntBASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 AC006435.4-201ENST00000625037 234 ntBASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 AL356737.1-201ENST00000634391 234 ntBASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLDN22Q8N7P3 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN22Q8N7P3 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN22Q8N7P3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN22Q8N7P3 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN22Q8N7P3 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CLDN22Q8N7P3 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms