Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 AC016694.1-201ENST00000434179 700 ntBASIC14.48□□□□□ -0.09
CCDC25Q86WR0 CHMP1AP1-201ENST00000445563 662 ntBASIC14.48□□□□□ -0.09
CCDC25Q86WR0 HIST2H2BB-201ENST00000449108 381 ntBASIC14.48□□□□□ -0.09
CCDC25Q86WR0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.48□□□□□ -0.09
CCDC25Q86WR0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 AC244394.1-201ENST00000435000 1665 ntBASIC14.48□□□□□ -0.09
CCDC25Q86WR0 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.48□□□□□ -0.09
CCDC25Q86WR0 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 AL358781.1-202ENST00000321081 1360 ntBASIC14.47□□□□□ -0.09
CCDC25Q86WR0 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 CAMKK2-205ENST00000392474 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 AC103592.1-201ENST00000394513 664 ntBASIC14.47□□□□□ -0.09
CCDC25Q86WR0 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 AC022217.1-201ENST00000521069 738 ntBASIC14.47□□□□□ -0.09
CCDC25Q86WR0 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 DUX4L46-201ENST00000566845 751 ntBASIC14.47□□□□□ -0.09
CCDC25Q86WR0 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 AC002350.2-201ENST00000623894 1828 ntBASIC14.47□□□□□ -0.09
CCDC25Q86WR0 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCDC25Q86WR0 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms