Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 AKR1B1P3-201ENST00000525311 588 ntBASIC12.71□□□□□ -0.37
CACNA1BQ00975 AC137932.2-201ENST00000562995 1205 ntTSL 2 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 AC092368.1-201ENST00000568014 733 ntBASIC12.71□□□□□ -0.37
CACNA1BQ00975 MT1G-204ENST00000569500 305 ntTSL 3 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 Metazoa_SRP.85-201ENST00000610909 260 ntBASIC12.71□□□□□ -0.37
CACNA1BQ00975 AC020763.2-201ENST00000623155 1255 ntBASIC12.71□□□□□ -0.37
CACNA1BQ00975 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CACNA1BQ00975 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CACNA1BQ00975 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CACNA1BQ00975 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CACNA1BQ00975 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CACNA1BQ00975 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.71□□□□□ -0.37
CACNA1BQ00975 AL118508.1-201ENST00000613502 2345 ntBASIC12.71□□□□□ -0.37
CACNA1BQ00975 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
CACNA1BQ00975 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.71□□□□□ -0.38
CACNA1BQ00975 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CACNA1BQ00975 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CACNA1BQ00975 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.71□□□□□ -0.38
CACNA1BQ00975 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.71□□□□□ -0.38
CACNA1BQ00975 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.71□□□□□ -0.38
CACNA1BQ00975 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CACNA1BQ00975 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CACNA1BQ00975 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CACNA1BQ00975 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CACNA1BQ00975 CDC23-201ENST00000394884 1079 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CACNA1BQ00975 LINC00313-206ENST00000441283 448 ntTSL 3 BASIC12.71□□□□□ -0.38
CACNA1BQ00975 AL662791.4-201ENST00000445544 317 ntTSL 3 BASIC12.71□□□□□ -0.38
CACNA1BQ00975 RN7SL342P-201ENST00000479616 294 ntBASIC12.71□□□□□ -0.38
CACNA1BQ00975 AC108082.1-201ENST00000510857 331 ntBASIC12.71□□□□□ -0.38
CACNA1BQ00975 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC12.71□□□□□ -0.38
CACNA1BQ00975 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC12.71□□□□□ -0.38
CACNA1BQ00975 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC12.71□□□□□ -0.38
CACNA1BQ00975 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.71□□□□□ -0.38
CACNA1BQ00975 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.71□□□□□ -0.38
CACNA1BQ00975 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.71□□□□□ -0.38
CACNA1BQ00975 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.71□□□□□ -0.38
CACNA1BQ00975 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CACNA1BQ00975 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
CACNA1BQ00975 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CACNA1BQ00975 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 GUCY1A3-213ENST00000621234 1788 ntTSL 5 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 FAHD2A-204ENST00000447036 1366 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 USP8-219ENST00000625664 1568 ntTSL 5 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 GSTA4-201ENST00000370959 793 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 POLR1C-202ENST00000372344 1119 ntTSL 5 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 ANO7-203ENST00000402530 894 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 Z92544.2-202ENST00000566927 407 ntTSL 3 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 AC091132.3-201ENST00000579701 470 ntBASIC12.7□□□□□ -0.38
CACNA1BQ00975 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 AC138645.1-201ENST00000582765 470 ntBASIC12.7□□□□□ -0.38
CACNA1BQ00975 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 DDX39B-201ENST00000376177 1529 ntTSL 5 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CACNA1BQ00975 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
CACNA1BQ00975 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms