Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GFRA1P56159 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.44□□□□□ -0.42
GFRA1P56159 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.44□□□□□ -0.42
GFRA1P56159 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
GFRA1P56159 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GFRA1P56159 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
GFRA1P56159 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GFRA1P56159 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GFRA1P56159 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GFRA1P56159 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC12.44□□□□□ -0.42
GFRA1P56159 ABCD1P4-201ENST00000399687 604 ntBASIC12.44□□□□□ -0.42
GFRA1P56159 ACTBP14-201ENST00000411655 1089 ntBASIC12.44□□□□□ -0.42
GFRA1P56159 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC12.44□□□□□ -0.42
GFRA1P56159 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC12.44□□□□□ -0.42
GFRA1P56159 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC12.44□□□□□ -0.42
GFRA1P56159 PPIA-208ENST00000489459 907 ntTSL 2 BASIC12.44□□□□□ -0.42
GFRA1P56159 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC12.44□□□□□ -0.42
GFRA1P56159 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.44□□□□□ -0.42
GFRA1P56159 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
GFRA1P56159 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC12.44□□□□□ -0.42
GFRA1P56159 NIFKP4-201ENST00000567275 1192 ntBASIC12.44□□□□□ -0.42
GFRA1P56159 RN7SL556P-201ENST00000582856 298 ntBASIC12.44□□□□□ -0.42
GFRA1P56159 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.44□□□□□ -0.42
GFRA1P56159 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.44□□□□□ -0.42
GFRA1P56159 AL132780.4-201ENST00000624870 1135 ntBASIC12.44□□□□□ -0.42
GFRA1P56159 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.44□□□□□ -0.42
GFRA1P56159 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.44□□□□□ -0.42
GFRA1P56159 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.44□□□□□ -0.42
GFRA1P56159 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.44□□□□□ -0.42
GFRA1P56159 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
GFRA1P56159 RCC2P5-201ENST00000492126 1487 ntBASIC12.44□□□□□ -0.42
GFRA1P56159 AC245140.2-201ENST00000624054 1939 ntBASIC12.44□□□□□ -0.42
GFRA1P56159 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
GFRA1P56159 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
GFRA1P56159 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.44□□□□□ -0.42
GFRA1P56159 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.44□□□□□ -0.42
GFRA1P56159 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
GFRA1P56159 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
GFRA1P56159 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
GFRA1P56159 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC12.44□□□□□ -0.42
GFRA1P56159 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
GFRA1P56159 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
GFRA1P56159 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
GFRA1P56159 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.43□□□□□ -0.42
GFRA1P56159 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
GFRA1P56159 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
GFRA1P56159 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC12.43□□□□□ -0.42
GFRA1P56159 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 AC021305.1-201ENST00000520656 1514 ntBASIC12.43□□□□□ -0.42
GFRA1P56159 MARK2P9-201ENST00000430958 1727 ntBASIC12.43□□□□□ -0.42
GFRA1P56159 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.43□□□□□ -0.42
GFRA1P56159 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
GFRA1P56159 AL137784.3-201ENST00000623858 2288 ntBASIC12.43□□□□□ -0.42
GFRA1P56159 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC12.43□□□□□ -0.42
GFRA1P56159 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC12.43□□□□□ -0.42
GFRA1P56159 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC12.43□□□□□ -0.42
GFRA1P56159 AC093826.1-201ENST00000508655 993 ntBASIC12.43□□□□□ -0.42
GFRA1P56159 CTBP2P4-201ENST00000513884 920 ntBASIC12.43□□□□□ -0.42
GFRA1P56159 COX5A-205ENST00000568517 582 ntTSL 3 BASIC12.43□□□□□ -0.42
GFRA1P56159 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.43□□□□□ -0.42
GFRA1P56159 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC12.43□□□□□ -0.42
GFRA1P56159 MIR4750-201ENST00000584564 56 ntBASIC12.43□□□□□ -0.42
GFRA1P56159 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC12.43□□□□□ -0.42
GFRA1P56159 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
GFRA1P56159 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
GFRA1P56159 AL118522.1-201ENST00000611368 560 ntBASIC12.43□□□□□ -0.42
GFRA1P56159 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC12.43□□□□□ -0.42
GFRA1P56159 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
GFRA1P56159 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.43□□□□□ -0.42
GFRA1P56159 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.43□□□□□ -0.42
GFRA1P56159 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
GFRA1P56159 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
GFRA1P56159 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.43□□□□□ -0.42
GFRA1P56159 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms