Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC12.36□□□□□ -0.43
SOX2P48431 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SOX2P48431 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.35□□□□□ -0.43
SOX2P48431 ELOVL4-201ENST00000369816 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 AC027369.3-201ENST00000530465 3707 ntBASIC12.35□□□□□ -0.43
SOX2P48431 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.35□□□□□ -0.43
SOX2P48431 GHET1-201ENST00000627071 1906 ntBASIC12.35□□□□□ -0.43
SOX2P48431 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
SOX2P48431 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC12.35□□□□□ -0.43
SOX2P48431 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.35□□□□□ -0.43
SOX2P48431 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.35□□□□□ -0.43
SOX2P48431 CNN2P8-201ENST00000421872 913 ntBASIC12.35□□□□□ -0.43
SOX2P48431 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.35□□□□□ -0.43
SOX2P48431 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.35□□□□□ -0.43
SOX2P48431 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.35□□□□□ -0.43
SOX2P48431 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.35□□□□□ -0.43
SOX2P48431 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC12.35□□□□□ -0.43
SOX2P48431 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.35□□□□□ -0.43
SOX2P48431 AC140658.4-201ENST00000561990 352 ntBASIC12.35□□□□□ -0.43
SOX2P48431 AP006547.1-201ENST00000563435 692 ntBASIC12.35□□□□□ -0.43
SOX2P48431 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.35□□□□□ -0.43
SOX2P48431 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.35□□□□□ -0.43
SOX2P48431 AC027796.2-201ENST00000575326 344 ntBASIC12.35□□□□□ -0.43
SOX2P48431 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.35□□□□□ -0.43
SOX2P48431 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.35□□□□□ -0.43
SOX2P48431 AC015936.2-201ENST00000593177 259 ntBASIC12.35□□□□□ -0.43
SOX2P48431 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.35□□□□□ -0.43
SOX2P48431 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.35□□□□□ -0.43
SOX2P48431 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.35□□□□□ -0.43
SOX2P48431 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.35□□□□□ -0.43
SOX2P48431 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.35□□□□□ -0.43
SOX2P48431 AL591471.1-201ENST00000621855 229 ntBASIC12.35□□□□□ -0.43
SOX2P48431 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SOX2P48431 AC020917.4-201ENST00000623994 1999 ntBASIC12.35□□□□□ -0.43
SOX2P48431 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SOX2P48431 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SOX2P48431 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.35□□□□□ -0.43
SOX2P48431 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.35□□□□□ -0.43
SOX2P48431 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.35□□□□□ -0.43
SOX2P48431 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
SOX2P48431 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.35□□□□□ -0.43
SOX2P48431 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.35□□□□□ -0.43
SOX2P48431 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
SOX2P48431 DPYSL5-201ENST00000288699 5209 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SOX2P48431 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SOX2P48431 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SOX2P48431 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.34□□□□□ -0.43
SOX2P48431 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SOX2P48431 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.34□□□□□ -0.43
SOX2P48431 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SOX2P48431 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
SOX2P48431 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SOX2P48431 AL358781.1-202ENST00000321081 1360 ntBASIC12.34□□□□□ -0.43
SOX2P48431 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SOX2P48431 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.34□□□□□ -0.43
SOX2P48431 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.34□□□□□ -0.43
SOX2P48431 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SOX2P48431 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SOX2P48431 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.34□□□□□ -0.43
SOX2P48431 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SOX2P48431 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SOX2P48431 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
SOX2P48431 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SOX2P48431 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SOX2P48431 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.34□□□□□ -0.43
SOX2P48431 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SOX2P48431 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.34□□□□□ -0.43
SOX2P48431 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
SOX2P48431 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.34□□□□□ -0.43
SOX2P48431 KLF2P1-201ENST00000447438 1042 ntBASIC12.34□□□□□ -0.43
SOX2P48431 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SOX2P48431 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.34□□□□□ -0.43
SOX2P48431 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.34□□□□□ -0.43
SOX2P48431 AGER-214ENST00000538695 487 ntTSL 2 BASIC12.34□□□□□ -0.43
SOX2P48431 C2orf69P2-201ENST00000562032 1123 ntBASIC12.34□□□□□ -0.43
SOX2P48431 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SOX2P48431 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.34□□□□□ -0.43
SOX2P48431 AC008735.3-201ENST00000596646 500 ntBASIC12.34□□□□□ -0.43
SOX2P48431 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SOX2P48431 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms