Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
RFC3P40938 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.85□□□□□ -0.35
RFC3P40938 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.85□□□□□ -0.35
RFC3P40938 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.85□□□□□ -0.35
RFC3P40938 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC12.85□□□□□ -0.35
RFC3P40938 SCARNA12-201ENST00000459155 270 ntBASIC12.85□□□□□ -0.35
RFC3P40938 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.85□□□□□ -0.35
RFC3P40938 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.85□□□□□ -0.35
RFC3P40938 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.85□□□□□ -0.35
RFC3P40938 MIR2392-201ENST00000584881 84 ntBASIC12.85□□□□□ -0.35
RFC3P40938 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC12.85□□□□□ -0.35
RFC3P40938 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.85□□□□□ -0.35
RFC3P40938 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC12.85□□□□□ -0.35
RFC3P40938 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.85□□□□□ -0.35
RFC3P40938 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
RFC3P40938 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 BX640514.1-201ENST00000583223 1918 ntBASIC12.85□□□□□ -0.35
RFC3P40938 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.85□□□□□ -0.35
RFC3P40938 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
RFC3P40938 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.85□□□□□ -0.35
RFC3P40938 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.84□□□□□ -0.35
RFC3P40938 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.84□□□□□ -0.35
RFC3P40938 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC12.84□□□□□ -0.35
RFC3P40938 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
RFC3P40938 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.84□□□□□ -0.35
RFC3P40938 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
RFC3P40938 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
RFC3P40938 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC12.84□□□□□ -0.35
RFC3P40938 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.84□□□□□ -0.35
RFC3P40938 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC12.84□□□□□ -0.35
RFC3P40938 AC098934.1-203ENST00000442868 1262 ntBASIC12.84□□□□□ -0.35
RFC3P40938 DPY19L2P5-201ENST00000456300 331 ntBASIC12.84□□□□□ -0.35
RFC3P40938 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.84□□□□□ -0.35
RFC3P40938 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.84□□□□□ -0.35
RFC3P40938 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC12.84□□□□□ -0.35
RFC3P40938 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 AP000911.2-201ENST00000534330 502 ntBASIC12.84□□□□□ -0.35
RFC3P40938 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.84□□□□□ -0.35
RFC3P40938 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.84□□□□□ -0.35
RFC3P40938 AC145285.5-201ENST00000562217 361 ntBASIC12.84□□□□□ -0.35
RFC3P40938 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.84□□□□□ -0.35
RFC3P40938 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.84□□□□□ -0.35
RFC3P40938 KRT8P18-201ENST00000413425 1445 ntBASIC12.84□□□□□ -0.35
RFC3P40938 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.84□□□□□ -0.35
RFC3P40938 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.84□□□□□ -0.35
RFC3P40938 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
RFC3P40938 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RFC3P40938 AC007952.5-201ENST00000572818 1486 ntBASIC12.84□□□□□ -0.35
RFC3P40938 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.84□□□□□ -0.35
RFC3P40938 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.84□□□□□ -0.35
RFC3P40938 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
RFC3P40938 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
RFC3P40938 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RFC3P40938 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.84□□□□□ -0.35
RFC3P40938 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
RFC3P40938 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms