Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MDH1P40925 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MDH1P40925 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MDH1P40925 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC14.02□□□□□ -0.17
MDH1P40925 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MDH1P40925 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC14.02□□□□□ -0.17
MDH1P40925 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
MDH1P40925 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
MDH1P40925 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC14.02□□□□□ -0.17
MDH1P40925 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
MDH1P40925 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC14.01□□□□□ -0.17
MDH1P40925 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC14.01□□□□□ -0.17
MDH1P40925 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 TUBB2A-201ENST00000333628 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC14.01□□□□□ -0.17
MDH1P40925 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.01□□□□□ -0.17
MDH1P40925 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
MDH1P40925 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
MDH1P40925 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
MDH1P40925 RGPD5-203ENST00000393283 3304 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 ELN-216ENST00000429192 3298 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
MDH1P40925 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC14.01□□□□□ -0.17
MDH1P40925 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.01□□□□□ -0.17
MDH1P40925 TSSK5P-201ENST00000423978 907 ntBASIC14.01□□□□□ -0.17
MDH1P40925 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.01□□□□□ -0.17
MDH1P40925 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.01□□□□□ -0.17
MDH1P40925 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.01□□□□□ -0.17
MDH1P40925 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC14.01□□□□□ -0.17
MDH1P40925 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.01□□□□□ -0.17
MDH1P40925 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.01□□□□□ -0.17
MDH1P40925 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.01□□□□□ -0.17
MDH1P40925 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.01□□□□□ -0.17
MDH1P40925 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.01□□□□□ -0.17
MDH1P40925 AC008825.2-201ENST00000603374 718 ntBASIC14.01□□□□□ -0.17
MDH1P40925 AL358472.5-202ENST00000641448 1267 ntBASIC14.01□□□□□ -0.17
MDH1P40925 ADAMTS10-211ENST00000597188 3749 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
MDH1P40925 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
MDH1P40925 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC14.01□□□□□ -0.17
MDH1P40925 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
MDH1P40925 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
MDH1P40925 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MDH1P40925 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
MDH1P40925 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 PISD-203ENST00000397500 2194 ntTSL 5 BASIC14□□□□□ -0.17
MDH1P40925 PKP4P1-201ENST00000426801 2158 ntBASIC14□□□□□ -0.17
MDH1P40925 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 NBPF17P-201ENST00000401087 2119 ntBASIC14□□□□□ -0.17
MDH1P40925 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC14□□□□□ -0.17
MDH1P40925 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
MDH1P40925 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC14□□□□□ -0.17
MDH1P40925 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14□□□□□ -0.17
MDH1P40925 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC14□□□□□ -0.17
MDH1P40925 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC14□□□□□ -0.17
MDH1P40925 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
MDH1P40925 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
MDH1P40925 HNRNPFP1-201ENST00000391730 1133 ntBASIC14□□□□□ -0.17
MDH1P40925 BAD-202ENST00000394531 631 ntTSL 3 BASIC14□□□□□ -0.17
MDH1P40925 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14□□□□□ -0.17
MDH1P40925 EIF4HP1-201ENST00000453115 687 ntBASIC14□□□□□ -0.17
MDH1P40925 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14□□□□□ -0.17
MDH1P40925 BAD-207ENST00000544785 525 ntTSL 3 BASIC14□□□□□ -0.17
MDH1P40925 AC106820.3-201ENST00000561653 397 ntBASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms