Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
KRT6AP02538 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.6□□□□□ -0.23
KRT6AP02538 AC104073.2-201ENST00000453737 312 ntBASIC13.6□□□□□ -0.23
KRT6AP02538 RN7SL277P-201ENST00000481521 288 ntBASIC13.6□□□□□ -0.23
KRT6AP02538 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.6□□□□□ -0.23
KRT6AP02538 IGHV3-71-201ENST00000523324 359 ntBASIC13.6□□□□□ -0.23
KRT6AP02538 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.6□□□□□ -0.23
KRT6AP02538 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC13.6□□□□□ -0.23
KRT6AP02538 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.6□□□□□ -0.23
KRT6AP02538 AC009779.1-201ENST00000551138 283 ntBASIC13.6□□□□□ -0.23
KRT6AP02538 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.6□□□□□ -0.23
KRT6AP02538 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
KRT6AP02538 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC13.6□□□□□ -0.23
KRT6AP02538 AL132994.2-201ENST00000603120 687 ntBASIC13.6□□□□□ -0.23
KRT6AP02538 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.6□□□□□ -0.23
KRT6AP02538 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC13.6□□□□□ -0.23
KRT6AP02538 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.6□□□□□ -0.23
KRT6AP02538 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 AL445209.1-201ENST00000607269 3491 ntBASIC13.6□□□□□ -0.23
KRT6AP02538 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.6□□□□□ -0.23
KRT6AP02538 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 MKRN5P-201ENST00000445263 1467 ntBASIC13.6□□□□□ -0.23
KRT6AP02538 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.6□□□□□ -0.23
KRT6AP02538 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KRT6AP02538 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
KRT6AP02538 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.6□□□□□ -0.23
KRT6AP02538 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
KRT6AP02538 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.59□□□□□ -0.23
KRT6AP02538 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
KRT6AP02538 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRT6AP02538 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRT6AP02538 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRT6AP02538 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.59□□□□□ -0.23
KRT6AP02538 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRT6AP02538 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.59□□□□□ -0.23
KRT6AP02538 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.59□□□□□ -0.23
KRT6AP02538 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
KRT6AP02538 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRT6AP02538 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRT6AP02538 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRT6AP02538 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRT6AP02538 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRT6AP02538 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KRT6AP02538 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC13.59□□□□□ -0.23
KRT6AP02538 AL445250.1-201ENST00000641671 2259 ntBASIC13.59□□□□□ -0.23
KRT6AP02538 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.59□□□□□ -0.23
KRT6AP02538 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRT6AP02538 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
KRT6AP02538 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRT6AP02538 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.59□□□□□ -0.23
KRT6AP02538 RN7SL530P-201ENST00000485097 298 ntBASIC13.59□□□□□ -0.23
KRT6AP02538 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC13.59□□□□□ -0.23
KRT6AP02538 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.59□□□□□ -0.23
KRT6AP02538 FAM8A2P-201ENST00000528813 1142 ntBASIC13.59□□□□□ -0.23
KRT6AP02538 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.59□□□□□ -0.23
KRT6AP02538 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.59□□□□□ -0.23
KRT6AP02538 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.59□□□□□ -0.23
KRT6AP02538 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.59□□□□□ -0.23
KRT6AP02538 AC093752.3-201ENST00000567343 901 ntBASIC13.59□□□□□ -0.23
KRT6AP02538 MIR3615-201ENST00000581999 87 ntBASIC13.59□□□□□ -0.23
KRT6AP02538 MIR3188-201ENST00000583494 85 ntBASIC13.59□□□□□ -0.23
KRT6AP02538 MIR4259-201ENST00000584466 101 ntBASIC13.59□□□□□ -0.23
KRT6AP02538 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.59□□□□□ -0.23
KRT6AP02538 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
KRT6AP02538 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRT6AP02538 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.59□□□□□ -0.23
KRT6AP02538 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KRT6AP02538 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
KRT6AP02538 CSPG4P11-201ENST00000560634 4910 ntBASIC13.59□□□□□ -0.23
KRT6AP02538 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
KRT6AP02538 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
KRT6AP02538 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.59□□□□□ -0.23
KRT6AP02538 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRT6AP02538 AP2A2-202ENST00000448903 4575 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRT6AP02538 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.59□□□□□ -0.23
KRT6AP02538 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
KRT6AP02538 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KRT6AP02538 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
KRT6AP02538 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.59□□□□□ -0.23
KRT6AP02538 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KRT6AP02538 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRT6AP02538 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
KRT6AP02538 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
KRT6AP02538 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
KRT6AP02538 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
KRT6AP02538 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
KRT6AP02538 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC13.58□□□□□ -0.23
KRT6AP02538 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
KRT6AP02538 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.58□□□□□ -0.23
KRT6AP02538 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
KRT6AP02538 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
KRT6AP02538 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
KRT6AP02538 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.58□□□□□ -0.24
KRT6AP02538 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KRT6AP02538 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KRT6AP02538 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms