Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHL1O00533 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHL1O00533 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHL1O00533 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHL1O00533 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHL1O00533 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC17.65■□□□□ 0.42
CHL1O00533 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHL1O00533 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHL1O00533 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHL1O00533 EGLN3-205ENST00000547327 2849 ntBASIC17.65■□□□□ 0.42
CHL1O00533 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHL1O00533 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CHL1O00533 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CHL1O00533 AP000244.1-201ENST00000424582 201 ntBASIC17.65■□□□□ 0.42
CHL1O00533 AC092810.2-201ENST00000431570 362 ntBASIC17.65■□□□□ 0.42
CHL1O00533 KRT18P46-201ENST00000435568 1279 ntBASIC17.65■□□□□ 0.42
CHL1O00533 BPIFB5P-201ENST00000457066 1099 ntBASIC17.65■□□□□ 0.42
CHL1O00533 RN7SL128P-201ENST00000467883 305 ntBASIC17.65■□□□□ 0.42
CHL1O00533 AC104212.2-201ENST00000478813 628 ntBASIC17.65■□□□□ 0.42
CHL1O00533 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHL1O00533 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC17.65■□□□□ 0.42
CHL1O00533 AC087203.1-201ENST00000532111 1181 ntBASIC17.65■□□□□ 0.42
CHL1O00533 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHL1O00533 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHL1O00533 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC17.65■□□□□ 0.42
CHL1O00533 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC17.65■□□□□ 0.42
CHL1O00533 MIR6746-201ENST00000620971 63 ntBASIC17.65■□□□□ 0.42
CHL1O00533 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC17.65■□□□□ 0.42
CHL1O00533 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC17.65■□□□□ 0.42
CHL1O00533 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CHL1O00533 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CHL1O00533 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC17.65■□□□□ 0.42
CHL1O00533 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHL1O00533 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC17.65■□□□□ 0.42
CHL1O00533 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHL1O00533 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHL1O00533 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CHL1O00533 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC17.64■□□□□ 0.42
CHL1O00533 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CHL1O00533 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC17.64■□□□□ 0.42
CHL1O00533 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHL1O00533 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CHL1O00533 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC17.64■□□□□ 0.42
CHL1O00533 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHL1O00533 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHL1O00533 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHL1O00533 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHL1O00533 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.64■□□□□ 0.41
CHL1O00533 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHL1O00533 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
CHL1O00533 FER1L4-210ENST00000615531 5998 ntBASIC17.64■□□□□ 0.41
CHL1O00533 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHL1O00533 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CHL1O00533 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHL1O00533 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHL1O00533 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC17.64■□□□□ 0.41
CHL1O00533 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC17.64■□□□□ 0.41
CHL1O00533 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC17.64■□□□□ 0.41
CHL1O00533 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC17.64■□□□□ 0.41
CHL1O00533 GOLGA2P7-209ENST00000560408 745 ntBASIC17.64■□□□□ 0.41
CHL1O00533 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC17.64■□□□□ 0.41
CHL1O00533 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC17.64■□□□□ 0.41
CHL1O00533 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC17.64■□□□□ 0.41
CHL1O00533 SMIM11B-202ENST00000619874 843 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHL1O00533 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC17.64■□□□□ 0.41
CHL1O00533 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC17.64■□□□□ 0.41
CHL1O00533 Z82244.1-201ENST00000631502 840 ntBASIC17.64■□□□□ 0.41
CHL1O00533 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHL1O00533 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.64■□□□□ 0.41
CHL1O00533 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHL1O00533 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CHL1O00533 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CHL1O00533 LSS-211ENST00000522411 2523 ntTSL 2 BASIC17.64■□□□□ 0.41
CHL1O00533 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.64■□□□□ 0.41
CHL1O00533 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC17.64■□□□□ 0.41
CHL1O00533 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHL1O00533 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CHL1O00533 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC17.64■□□□□ 0.41
CHL1O00533 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHL1O00533 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC17.64■□□□□ 0.41
CHL1O00533 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHL1O00533 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC17.64■□□□□ 0.41
CHL1O00533 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHL1O00533 AC012531.1-201ENST00000562848 2680 ntBASIC17.64■□□□□ 0.41
CHL1O00533 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHL1O00533 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHL1O00533 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CHL1O00533 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CHL1O00533 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CHL1O00533 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CHL1O00533 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHL1O00533 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHL1O00533 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHL1O00533 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
CHL1O00533 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.63■□□□□ 0.41
CHL1O00533 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHL1O00533 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHL1O00533 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC17.63■□□□□ 0.41
CHL1O00533 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CHL1O00533 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms