Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 GP6-203ENST00000417454 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
COLCA2A8K830 LINC02473-201ENST00000569621 2195 ntTSL 2 BASIC10.58□□□□□ -0.72
COLCA2A8K830 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
COLCA2A8K830 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
COLCA2A8K830 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
COLCA2A8K830 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
COLCA2A8K830 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC10.58□□□□□ -0.72
COLCA2A8K830 AC008132.1-202ENST00000342005 1389 ntBASIC10.58□□□□□ -0.72
COLCA2A8K830 KRT8P28-201ENST00000433288 1390 ntBASIC10.58□□□□□ -0.72
COLCA2A8K830 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
COLCA2A8K830 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
COLCA2A8K830 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
COLCA2A8K830 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
COLCA2A8K830 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC10.58□□□□□ -0.72
COLCA2A8K830 HMGA1P1-201ENST00000415560 1062 ntBASIC10.58□□□□□ -0.72
COLCA2A8K830 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC10.58□□□□□ -0.72
COLCA2A8K830 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC10.58□□□□□ -0.72
COLCA2A8K830 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC10.58□□□□□ -0.72
COLCA2A8K830 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC10.58□□□□□ -0.72
COLCA2A8K830 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
COLCA2A8K830 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
COLCA2A8K830 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC10.58□□□□□ -0.72
COLCA2A8K830 AC096734.2-201ENST00000562054 433 ntBASIC10.58□□□□□ -0.72
COLCA2A8K830 AC084262.1-201ENST00000567818 751 ntBASIC10.58□□□□□ -0.72
COLCA2A8K830 MIR4751-201ENST00000578027 74 ntBASIC10.58□□□□□ -0.72
COLCA2A8K830 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC10.58□□□□□ -0.72
COLCA2A8K830 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC10.58□□□□□ -0.72
COLCA2A8K830 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC10.58□□□□□ -0.72
COLCA2A8K830 AP006294.2-201ENST00000641667 209 ntBASIC10.58□□□□□ -0.72
COLCA2A8K830 SUSD4-207ENST00000484758 2736 ntTSL 2 BASIC10.58□□□□□ -0.72
COLCA2A8K830 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
COLCA2A8K830 BTNL3-201ENST00000342868 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
COLCA2A8K830 HCG18-236ENST00000438412 2440 ntTSL 2 BASIC10.58□□□□□ -0.72
COLCA2A8K830 B3GALT5-204ENST00000398714 2341 ntTSL 5 BASIC10.58□□□□□ -0.72
COLCA2A8K830 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
COLCA2A8K830 ACBD5-203ENST00000375901 3685 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
COLCA2A8K830 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
COLCA2A8K830 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC10.58□□□□□ -0.72
COLCA2A8K830 GABRR1-201ENST00000369451 1823 ntTSL 5 BASIC10.58□□□□□ -0.72
COLCA2A8K830 NBPF5P-201ENST00000357046 1606 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
COLCA2A8K830 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
COLCA2A8K830 PRDM2-204ENST00000376048 2688 ntTSL 2 BASIC10.58□□□□□ -0.72
COLCA2A8K830 VPS45-211ENST00000535106 2695 ntTSL 5 BASIC10.58□□□□□ -0.72
COLCA2A8K830 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
COLCA2A8K830 ENOX2-203ENST00000370935 3963 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
COLCA2A8K830 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC10.58□□□□□ -0.72
COLCA2A8K830 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
COLCA2A8K830 VRK3-205ENST00000593919 1979 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
COLCA2A8K830 TNIP1-218ENST00000523338 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 BSND-201ENST00000371265 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 STX16-202ENST00000355957 4897 ntTSL 2 BASIC10.57□□□□□ -0.72
COLCA2A8K830 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 TM2D2-202ENST00000456397 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC10.57□□□□□ -0.72
COLCA2A8K830 ZNF423-201ENST00000262383 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 ALDH1A2-204ENST00000537372 3700 ntTSL 2 BASIC10.57□□□□□ -0.72
COLCA2A8K830 SNAI1-201ENST00000244050 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
COLCA2A8K830 DCAF6-204ENST00000432587 3522 ntTSL 2 BASIC10.57□□□□□ -0.72
COLCA2A8K830 CEACAM19-201ENST00000358777 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 HNRNPUL1-202ENST00000352456 3426 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 C1orf94-201ENST00000373374 2136 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 DUOXA1-208ENST00000558996 2684 ntTSL 2 BASIC10.57□□□□□ -0.72
COLCA2A8K830 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 PCDHB7-201ENST00000231137 3765 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
COLCA2A8K830 PRDM7-202ENST00000449207 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 PLEKHG6-204ENST00000449001 3111 ntTSL 2 BASIC10.57□□□□□ -0.72
COLCA2A8K830 NAGA-201ENST00000396398 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC10.57□□□□□ -0.72
COLCA2A8K830 ARMC1-201ENST00000276569 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 SERPINA10-202ENST00000393096 2451 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 KRT8P12-202ENST00000472924 1397 ntBASIC10.57□□□□□ -0.72
COLCA2A8K830 CYP26B1-202ENST00000412253 4025 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 TMEM107-208ENST00000532998 2358 ntTSL 2 BASIC10.57□□□□□ -0.72
COLCA2A8K830 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
COLCA2A8K830 PRORSD1P-201ENST00000295112 541 ntBASIC10.57□□□□□ -0.72
COLCA2A8K830 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 MIR346-201ENST00000362234 95 ntBASIC10.57□□□□□ -0.72
COLCA2A8K830 RN7SKP230-201ENST00000365642 335 ntBASIC10.57□□□□□ -0.72
COLCA2A8K830 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
COLCA2A8K830 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 FXN-203ENST00000396366 922 ntTSL 2 BASIC10.57□□□□□ -0.72
COLCA2A8K830 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC10.57□□□□□ -0.72
COLCA2A8K830 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC10.57□□□□□ -0.72
COLCA2A8K830 AL671277.1-201ENST00000429656 993 ntBASIC10.57□□□□□ -0.72
COLCA2A8K830 HNRNPA1P2-207ENST00000432375 960 ntBASIC10.57□□□□□ -0.72
COLCA2A8K830 EIF4HP1-201ENST00000453115 687 ntBASIC10.57□□□□□ -0.72
COLCA2A8K830 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
COLCA2A8K830 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC10.57□□□□□ -0.72
COLCA2A8K830 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms