Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
SNCAIPQ9Y6H5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SNCAIPQ9Y6H5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC26.35■■□□□ 1.81
SNCAIPQ9Y6H5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SNCAIPQ9Y6H5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC26.35■■□□□ 1.81
SNCAIPQ9Y6H5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
SNCAIPQ9Y6H5 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC26.35■■□□□ 1.81
SNCAIPQ9Y6H5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SNCAIPQ9Y6H5 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.35■■□□□ 1.81
SNCAIPQ9Y6H5 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SNCAIPQ9Y6H5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
SNCAIPQ9Y6H5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
SNCAIPQ9Y6H5 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
SNCAIPQ9Y6H5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.35■■□□□ 1.81
SNCAIPQ9Y6H5 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
SNCAIPQ9Y6H5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
SNCAIPQ9Y6H5 ME3-201ENST00000323418 1068 ntTSL 5 BASIC26.34■■□□□ 1.81
SNCAIPQ9Y6H5 OR2I1P-207ENST00000453522 948 ntBASIC26.34■■□□□ 1.81
SNCAIPQ9Y6H5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.34■■□□□ 1.81
SNCAIPQ9Y6H5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
SNCAIPQ9Y6H5 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SNCAIPQ9Y6H5 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SNCAIPQ9Y6H5 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SNCAIPQ9Y6H5 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SNCAIPQ9Y6H5 LINC02228-203ENST00000641970 1355 ntBASIC26.33■■□□□ 1.81
SNCAIPQ9Y6H5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
SNCAIPQ9Y6H5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.33■■□□□ 1.81
SNCAIPQ9Y6H5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
SNCAIPQ9Y6H5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC26.33■■□□□ 1.81
SNCAIPQ9Y6H5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SNCAIPQ9Y6H5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNCAIPQ9Y6H5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNCAIPQ9Y6H5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.32■■□□□ 1.8
SNCAIPQ9Y6H5 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNCAIPQ9Y6H5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNCAIPQ9Y6H5 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNCAIPQ9Y6H5 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SNCAIPQ9Y6H5 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.32■■□□□ 1.8
SNCAIPQ9Y6H5 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.32■■□□□ 1.8
SNCAIPQ9Y6H5 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.31■■□□□ 1.8
SNCAIPQ9Y6H5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC26.31■■□□□ 1.8
SNCAIPQ9Y6H5 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNCAIPQ9Y6H5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNCAIPQ9Y6H5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
SNCAIPQ9Y6H5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC26.31■■□□□ 1.8
SNCAIPQ9Y6H5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNCAIPQ9Y6H5 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC26.31■■□□□ 1.8
SNCAIPQ9Y6H5 DENND3-207ENST00000518347 850 ntTSL 2 BASIC26.31■■□□□ 1.8
SNCAIPQ9Y6H5 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNCAIPQ9Y6H5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNCAIPQ9Y6H5 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNCAIPQ9Y6H5 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
SNCAIPQ9Y6H5 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SNCAIPQ9Y6H5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SNCAIPQ9Y6H5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SNCAIPQ9Y6H5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
SNCAIPQ9Y6H5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
SNCAIPQ9Y6H5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC26.3■■□□□ 1.8
SNCAIPQ9Y6H5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SNCAIPQ9Y6H5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.3■■□□□ 1.8
SNCAIPQ9Y6H5 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SNCAIPQ9Y6H5 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SNCAIPQ9Y6H5 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.3■■□□□ 1.8
SNCAIPQ9Y6H5 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
SNCAIPQ9Y6H5 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SNCAIPQ9Y6H5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.29■■□□□ 1.8
SNCAIPQ9Y6H5 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
SNCAIPQ9Y6H5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
SNCAIPQ9Y6H5 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SNCAIPQ9Y6H5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC26.29■■□□□ 1.8
SNCAIPQ9Y6H5 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SNCAIPQ9Y6H5 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.29■■□□□ 1.8
SNCAIPQ9Y6H5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SNCAIPQ9Y6H5 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SNCAIPQ9Y6H5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC26.29■■□□□ 1.8
SNCAIPQ9Y6H5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.28■■□□□ 1.8
SNCAIPQ9Y6H5 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC26.28■■□□□ 1.8
SNCAIPQ9Y6H5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SNCAIPQ9Y6H5 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNCAIPQ9Y6H5 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNCAIPQ9Y6H5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNCAIPQ9Y6H5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SNCAIPQ9Y6H5 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SNCAIPQ9Y6H5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
SNCAIPQ9Y6H5 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.27■■□□□ 1.8
SNCAIPQ9Y6H5 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
SNCAIPQ9Y6H5 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNCAIPQ9Y6H5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
SNCAIPQ9Y6H5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.27■■□□□ 1.8
SNCAIPQ9Y6H5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SNCAIPQ9Y6H5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNCAIPQ9Y6H5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNCAIPQ9Y6H5 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNCAIPQ9Y6H5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
SNCAIPQ9Y6H5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.27■■□□□ 1.8
SNCAIPQ9Y6H5 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.26■■□□□ 1.79
SNCAIPQ9Y6H5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
SNCAIPQ9Y6H5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.26■■□□□ 1.79
SNCAIPQ9Y6H5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SNCAIPQ9Y6H5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms