Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC092171.4-201ENST00000609130 632 ntBASIC21.92■■□□□ 1.1
PCDHB11Q9Y5F2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB11Q9Y5F2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB11Q9Y5F2 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB11Q9Y5F2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
PCDHB11Q9Y5F2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDHB11Q9Y5F2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB11Q9Y5F2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDHB11Q9Y5F2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB11Q9Y5F2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB11Q9Y5F2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
PCDHB11Q9Y5F2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB11Q9Y5F2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB11Q9Y5F2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.91■■□□□ 1.1
PCDHB11Q9Y5F2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDHB11Q9Y5F2 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDHB11Q9Y5F2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PCDHB11Q9Y5F2 AL031432.3-201ENST00000607698 485 ntBASIC21.91■■□□□ 1.1
PCDHB11Q9Y5F2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB11Q9Y5F2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB11Q9Y5F2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDHB11Q9Y5F2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDHB11Q9Y5F2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB11Q9Y5F2 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
PCDHB11Q9Y5F2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB11Q9Y5F2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB11Q9Y5F2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.9■■□□□ 1.1
PCDHB11Q9Y5F2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDHB11Q9Y5F2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHB11Q9Y5F2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHB11Q9Y5F2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
PCDHB11Q9Y5F2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PCDHB11Q9Y5F2 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.89■■□□□ 1.09
PCDHB11Q9Y5F2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB11Q9Y5F2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB11Q9Y5F2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.89■■□□□ 1.09
PCDHB11Q9Y5F2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB11Q9Y5F2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHB11Q9Y5F2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB11Q9Y5F2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDHB11Q9Y5F2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHB11Q9Y5F2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB11Q9Y5F2 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB11Q9Y5F2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB11Q9Y5F2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB11Q9Y5F2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB11Q9Y5F2 AC104564.3-201ENST00000582367 638 ntBASIC21.88■■□□□ 1.09
PCDHB11Q9Y5F2 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.88■■□□□ 1.09
PCDHB11Q9Y5F2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDHB11Q9Y5F2 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.88■■□□□ 1.09
PCDHB11Q9Y5F2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB11Q9Y5F2 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB11Q9Y5F2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHB11Q9Y5F2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB11Q9Y5F2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB11Q9Y5F2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHB11Q9Y5F2 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB11Q9Y5F2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB11Q9Y5F2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHB11Q9Y5F2 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB11Q9Y5F2 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB11Q9Y5F2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHB11Q9Y5F2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHB11Q9Y5F2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PCDHB11Q9Y5F2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHB11Q9Y5F2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB11Q9Y5F2 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
PCDHB11Q9Y5F2 DUSP8P5-201ENST00000422884 1815 ntBASIC21.86■■□□□ 1.09
PCDHB11Q9Y5F2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB11Q9Y5F2 AC026271.2-201ENST00000428091 497 ntBASIC21.86■■□□□ 1.09
PCDHB11Q9Y5F2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.86■■□□□ 1.09
PCDHB11Q9Y5F2 AC105265.2-201ENST00000467189 838 ntBASIC21.86■■□□□ 1.09
PCDHB11Q9Y5F2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PCDHB11Q9Y5F2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHB11Q9Y5F2 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHB11Q9Y5F2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDHB11Q9Y5F2 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHB11Q9Y5F2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDHB11Q9Y5F2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
PCDHB11Q9Y5F2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHB11Q9Y5F2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB11Q9Y5F2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDHB11Q9Y5F2 SYT6-210ENST00000641643 1587 ntBASIC21.85■■□□□ 1.09
PCDHB11Q9Y5F2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB11Q9Y5F2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHB11Q9Y5F2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB11Q9Y5F2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
PCDHB11Q9Y5F2 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB11Q9Y5F2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB11Q9Y5F2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB11Q9Y5F2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB11Q9Y5F2 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB11Q9Y5F2 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB11Q9Y5F2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.84■■□□□ 1.09
PCDHB11Q9Y5F2 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHB11Q9Y5F2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.84■■□□□ 1.09
PCDHB11Q9Y5F2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB11Q9Y5F2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHB11Q9Y5F2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.83■■□□□ 1.09
PCDHB11Q9Y5F2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms