Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXOSC1Q9Y3B2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.05■□□□□ 0.8
EXOSC1Q9Y3B2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXOSC1Q9Y3B2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
EXOSC1Q9Y3B2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
EXOSC1Q9Y3B2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EXOSC1Q9Y3B2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EXOSC1Q9Y3B2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXOSC1Q9Y3B2 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXOSC1Q9Y3B2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXOSC1Q9Y3B2 AC092053.2-201ENST00000640557 1818 ntBASIC20.04■□□□□ 0.8
EXOSC1Q9Y3B2 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
EXOSC1Q9Y3B2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXOSC1Q9Y3B2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.04■□□□□ 0.8
EXOSC1Q9Y3B2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
EXOSC1Q9Y3B2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
EXOSC1Q9Y3B2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.04■□□□□ 0.8
EXOSC1Q9Y3B2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.04■□□□□ 0.8
EXOSC1Q9Y3B2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EXOSC1Q9Y3B2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
EXOSC1Q9Y3B2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
EXOSC1Q9Y3B2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.04■□□□□ 0.8
EXOSC1Q9Y3B2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.03■□□□□ 0.8
EXOSC1Q9Y3B2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXOSC1Q9Y3B2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXOSC1Q9Y3B2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXOSC1Q9Y3B2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.03■□□□□ 0.8
EXOSC1Q9Y3B2 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.03■□□□□ 0.8
EXOSC1Q9Y3B2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.03■□□□□ 0.8
EXOSC1Q9Y3B2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXOSC1Q9Y3B2 AC087393.1-201ENST00000582896 145 ntBASIC20.03■□□□□ 0.8
EXOSC1Q9Y3B2 AC079630.1-202ENST00000618127 1840 ntBASIC20.03■□□□□ 0.8
EXOSC1Q9Y3B2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
EXOSC1Q9Y3B2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXOSC1Q9Y3B2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
EXOSC1Q9Y3B2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
EXOSC1Q9Y3B2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EXOSC1Q9Y3B2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
EXOSC1Q9Y3B2 C11orf96-202ENST00000528572 1834 ntBASIC20.02■□□□□ 0.8
EXOSC1Q9Y3B2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.8
EXOSC1Q9Y3B2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
EXOSC1Q9Y3B2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
EXOSC1Q9Y3B2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EXOSC1Q9Y3B2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
EXOSC1Q9Y3B2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
EXOSC1Q9Y3B2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
EXOSC1Q9Y3B2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
EXOSC1Q9Y3B2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
EXOSC1Q9Y3B2 AC139530.1-201ENST00000575312 1977 ntBASIC20.01■□□□□ 0.79
EXOSC1Q9Y3B2 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
EXOSC1Q9Y3B2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
EXOSC1Q9Y3B2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
EXOSC1Q9Y3B2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
EXOSC1Q9Y3B2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EXOSC1Q9Y3B2 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
EXOSC1Q9Y3B2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20■□□□□ 0.79
EXOSC1Q9Y3B2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20■□□□□ 0.79
EXOSC1Q9Y3B2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
EXOSC1Q9Y3B2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
EXOSC1Q9Y3B2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
EXOSC1Q9Y3B2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EXOSC1Q9Y3B2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EXOSC1Q9Y3B2 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EXOSC1Q9Y3B2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
EXOSC1Q9Y3B2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EXOSC1Q9Y3B2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20■□□□□ 0.79
EXOSC1Q9Y3B2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20■□□□□ 0.79
EXOSC1Q9Y3B2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
EXOSC1Q9Y3B2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
EXOSC1Q9Y3B2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.99■□□□□ 0.79
EXOSC1Q9Y3B2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.99■□□□□ 0.79
EXOSC1Q9Y3B2 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
EXOSC1Q9Y3B2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EXOSC1Q9Y3B2 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
EXOSC1Q9Y3B2 AC011551.1-201ENST00000614101 683 ntBASIC19.99■□□□□ 0.79
EXOSC1Q9Y3B2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
EXOSC1Q9Y3B2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
EXOSC1Q9Y3B2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
EXOSC1Q9Y3B2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.99■□□□□ 0.79
EXOSC1Q9Y3B2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXOSC1Q9Y3B2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EXOSC1Q9Y3B2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EXOSC1Q9Y3B2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EXOSC1Q9Y3B2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
EXOSC1Q9Y3B2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXOSC1Q9Y3B2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
EXOSC1Q9Y3B2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXOSC1Q9Y3B2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
EXOSC1Q9Y3B2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXOSC1Q9Y3B2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
EXOSC1Q9Y3B2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXOSC1Q9Y3B2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.98■□□□□ 0.79
EXOSC1Q9Y3B2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
EXOSC1Q9Y3B2 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXOSC1Q9Y3B2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
EXOSC1Q9Y3B2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.97■□□□□ 0.79
EXOSC1Q9Y3B2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
EXOSC1Q9Y3B2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
EXOSC1Q9Y3B2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
EXOSC1Q9Y3B2 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms